PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g864450.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 308aa MW: 34103.6 Da PI: 4.5607

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g864450.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	94.9	8.5e-30	10	111	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+l+++C+++C++apyf +e+ +f +h +FGa++++++l+ lp +er a ++++eA+ar dP+yGa++ il+lq+q+ + +a Pd.00g864450.m01 10 PCGACKFLKKRCKRGCIFAPYFMHEEaITDFSSIHNVFGANKMSRILSMLPMSERAVASWTMTFEAHARDVDPIYGATSYILDLQEQVLNIQA 102 7*******************999856************************************************************* PP DUF260 93 elallkeel 101 +l++++e+l Pd.00g864450.m01 103 QLDEAHEQL 111 **99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MSSRTRTFNP CGACKFLKKR CKRGCIFAPY FMHEEAITDF SSIHNVFGAN KMSRILSMLP 60 MSERAVASWT MTFEAHARDV DPIYGATSYI LDLQEQVLNI QAQLDEAHEQ LACAIAHVAD 120 PNQDLANPTE QSEVANPTEQ AAVAKPTEFE SLPQFSFTLT NNVYNENMNL NYHVSGSYKN 180 TVNIPTENVA DGWVNNEVLN IQAQLDEAHE QLARAVAPVA NPNQDLENSN EQSEVANPTE 240 QAAVAKPTEF ESLSQFSFTH TNNVDNENMN LNYHDDPSTS AGKGSNLTET PSSFLVGEGA 300 RIWAKSKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42440.1	2e-39	LBD family protein