PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g863110.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 245aa    MW: 26085.3 Da    PI: 9.5511
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g863110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof70.91.9e-2217512761
            zf-Dof 27 sqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                       qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++
  Pd.00g863110.m01 17 GQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSA 51
                      5*******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MSVWSRLKSR APDGTRGQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKS ATVSTTPICK  60
AASGKLKMVA SEIGRSGFSG GFDNDVQASP ILWGSPQNSH LLALLRASHQ NQNPNPNPNP  120
ICNSVNVKEE GAMNMIGSHM MTTEPAMSTA RTLGLDPVCQ APSLVGHEVQ SNIGIQELFQ  180
RLRSSSSSSG GYYSDHLNNA VMSSSSSTPS ILDSTPAVGG GDMGYWNPAF TAWSSDLPTT  240
NGAYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-18Dof family protein