PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g861830.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 624aa    MW: 67679.2 Da    PI: 4.9556
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g861830.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.25.7e-1132546242374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        ++Ll+cA+ ++++d  +a + L rl+e +s +gdp++R+ +yfteAL++r+++   +  k+l++++t ++  ++ + ++k++++++P+ kf+
  Pd.00g861830.m01 254 LKALLDCAR-LAESDPDRAVKSLIRLRESVSDRGDPTERVGFYFTEALQSRVSS--LQSEKSLAATTTYDTACEDFTLSYKALNDACPYSKFA 343
                       689******.566699999***********************************..6666778888888888********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + +
  Pd.00g861830.m01 344 HLTANQAILEATERATKIHIVDFGIVQGVQWAALLQALATRSTGKPsRIRISGIPAPSLGtsPAASLFATGNRLRDFAKLLELNFEFEP-ILT 435
                       ******************************************666659*********99999999************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                        +++le + +rv+p+EalaVnl+lql++llde+ +  +   + Lkl ksl+Pk+v++ e ea++++  F  rf +al+yy+alf+sle ++pr
  Pd.00g861830.m01 436 PVHELEESCFRVEPDEALAVNLMLQLYNLLDETPTAVQ---SALKLAKSLNPKIVTLGEYEANLSRVGFTSRFKNALKYYTALFESLEPNMPR 525
                       ******************************99999998...9*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv.lgWkdrpLv 368
                       +s er kvE+ llgr+i  vv  e+   +rer e +e+W+  +e++GF+pv+ls++a++qak ll ++++  y++ e+   ++ l W++ pL+
  Pd.00g861830.m01 526 DSPERLKVEKLLLGRRIGGVVGPEQPGtKRERFEDKEQWKYLMESSGFEPVALSHYAVSQAKILLWNYNNSLYSLIESPPGFLsLAWNEVPLF 618
                       ***********************998769****************************************999999888666666********* PP

              GRAS 369 svSaWr 374
                       +vS+Wr
  Pd.00g861830.m01 619 TVSSWR 624
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    
MRSGSHTVAD FGWTLISSSS QRASALGLVF GPSSGVQKPS CDPVVSGPPV VGFRLDLAGE  60
WHICAQTVAI SWRLLSNPNL GYGLTGSGYT DPFQLSGSSD AGGEPGFPFP NLDHHPTGFR  120
FSDLGGGGAA EFDSDEWMDS IIGGGDSTDS SNLPSACDTW HGSNADFGLY GADPFQPPCP  180
SRLSNPCSPP SDLNRVIFSE TQNQLPAWTA PPPPPPAPHV VVKQAKSADP PPQPNDAVGV  240
SSRSPEIESA PPLLKALLDC ARLAESDPDR AVKSLIRLRE SVSDRGDPTE RVGFYFTEAL  300
QSRVSSLQSE KSLAATTTYD TACEDFTLSY KALNDACPYS KFAHLTANQA ILEATERATK  360
IHIVDFGIVQ GVQWAALLQA LATRSTGKPS RIRISGIPAP SLGTSPAASL FATGNRLRDF  420
AKLLELNFEF EPILTPVHEL EESCFRVEPD EALAVNLMLQ LYNLLDETPT AVQSALKLAK  480
SLNPKIVTLG EYEANLSRVG FTSRFKNALK YYTALFESLE PNMPRDSPER LKVEKLLLGR  540
RIGGVVGPEQ PGTKRERFED KEQWKYLMES SGFEPVALSH YAVSQAKILL WNYNNSLYSL  600
IESPPGFLSL AWNEVPLFTV SSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein