PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g860880.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WOX

Protein Properties

Length: 413aa MW: 45356.2 Da PI: 7.5011

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g860880.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.5e-18	57	117	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ Pd.00g860880.m01 57 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 117 89***************99***********************************995 PP
2	Wus_type_Homeobox	112	3.1e-36	56	118	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k Pd.00g860880.m01 56 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 118 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MASSNRHWPS MFKSKPANCS THHQWQHDIN PSLVSNGCHR PSYSSVAGCE ERSPEPKPRW 60 NPKPEQIRIL EAIFNSGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKLR 120 HLHNSSKQQQ THHRTHLPLT TPVSTSTLNI INAAAPSSSS SSSEKSSPKS APNNKAFSMG 180 FSSNVAAHDV SINSPTASVN QQSSFFQPHH QHHSEVLPEP FFFPMHPNPN CNFTQGFCFS 240 ELSNVVDVPN HGTHEQTNNN TGPCTSLLLS EIMSHGAAMS RKEYHQEDEM KVMNMKNMDP 300 HHLNYSLNVT TTSPTSHTNM VASHTTGPTT SVAVPSPMIH NIQGGVGEAG AMGAGGAEKS 360 TVFINDVAFE VGAGPFNVRE AFGDDAVLIH SSGHPVLTNE WGNSHPNEVI SSS

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MASSNRHWPS MFKSKPANCS THHQWQHDIN PSLVSNGCHR PSYSSVAGCE ERSPEPKPRW  60
NPKPEQIRIL EAIFNSGMVN PPRDEIRKIR AQLQEYGQVG DANVFYWFQN RKSRSKHKLR  120
HLHNSSKQQQ THHRTHLPLT TPVSTSTLNI INAAAPSSSS SSSEKSSPKS APNNKAFSMG  180
FSSNVAAHDV SINSPTASVN QQSSFFQPHH QHHSEVLPEP FFFPMHPNPN CNFTQGFCFS  240
ELSNVVDVPN HGTHEQTNNN TGPCTSLLLS EIMSHGAAMS RKEYHQEDEM KVMNMKNMDP  300
HHLNYSLNVT TTSPTSHTNM VASHTTGPTT SVAVPSPMIH NIQGGVGEAG AMGAGGAEKS  360
TVFINDVAFE VGAGPFNVRE AFGDDAVLIH SSGHPVLTNE WGNSHPNEVI SSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-65	WOX family protein