PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g857920.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 348aa MW: 39710.5 Da PI: 7.5952 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 47.1 | 4.2e-15 | 49 | 140 | 3 | 99 |
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE.. CS B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgrsefel 92 k l ++++++++p kf++++ +++ e l+l+d+s sW+v++ ++k+ g++++++GW+eF k+n L +++++ + ++g++ f Pd.00g857920.m01 49 KLL---AGFNTDCMRIPQKFLKHMlkDLS--ERAILKLKDSSDSSWTVTV-HNKREGAVYFKNGWEEFIKDNSLGtDNEMLQLFYEGKMHF-- 133 555...5677788********77775444..5569***************.6777788****************97788888888887888.. PP EEEEE-S CS B3 93 vvkvfrk 99 v++f k Pd.00g857920.m01 134 SVRIFGK 140 8888765 PP | |||||||
2 | B3 | 56.8 | 4e-18 | 268 | 347 | 16 | 99 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +p f +eh ++ ++++ +l++ +g +W+v++ + ++++++ +++GW +Fv+an++++gD+++F+l + + +++v+++rk Pd.00g857920.m01 268 QFIPTAFSREHF-PQGKGFKAILKNAEGGKWTVNC-IPNSPQSHNFSAGWYKFVSANQIRVGDTCIFELLS--RYQMMVHILRK 347 579********4.346799****************.6999999*************************876..55569999997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MASQSTQSAA AVTSQQNPKK HRASLSAQTE EKMVRKISKN EEEKHSFFKL LAGFNTDCMR 60 IPQKFLKHML KDLSERAILK LKDSSDSSWT VTVHNKREGA VYFKNGWEEF IKDNSLGTDN 120 EMLQLFYEGK MHFSVRIFGK NGIERSEELS SSEEEEEDSE DNTSEDLEAD FTKIGSLHNS 180 LAKNTTKRPR GRPRKYPVSS SKPRPLKSCK VESGEELSSS KSSELNEIKE EEEDSEDSTS 240 EDLEGVEPEA FKSNFPYFKG IIRQTKCQFI PTAFSREHFP QGKGFKAILK NAEGGKWTVN 300 CIPNSPQSHN FSAGWYKFVS ANQIRVGDTC IFELLSRYQM MVHILRKR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 187 | 195 | KRPRGRPRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16210.2 | 6e-11 | B3 family protein |