PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g857060.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 314aa MW: 35472.2 Da PI: 10.0317 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 50.4 | 6e-16 | 29 | 121 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +Liea e++ +l+rg+l++++Weev++++ + +r+ +qCk++ + l+k+yk +k++ ++ + + +s +p+f+ l+ Pd.00g857060.m01 29 CWSEDATFTLIEAWGERHLSLNRGNLRQKHWEEVADAVnashvtaENPRSRRTDVQCKNRVDTLKKKYKIEKARVSDSNGDYTSPWPFFSLLD 121 7******************************************955556688************************99999999*****9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MDFVAGSPSP VTAPRPPSKT ASVPVREDCW SEDATFTLIE AWGERHLSLN RGNLRQKHWE 60 EVADAVNASH VTAENPRSRR TDVQCKNRVD TLKKKYKIEK ARVSDSNGDY TSPWPFFSLL 120 DSLIGSKFPK PSPPLPRRCS PSPPLPCRSP PSAPLQWTFP VARRSATVKR PAPAFFPAPG 180 DEPVLSQKLD FSAFAAVAAA AAAESEESEG SPSRSSVGGS RMRDRDREVG CVELAMAIER 240 FAEIYERVEQ RKQRQMVELE KQRMQFAKDL EYHRMQLFME TTKHQLRKMK RAKRSSSSPD 300 NYLEATRFDS HRLV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 286 | 293 | LRKMKRAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 6e-70 | Trihelix family protein |