PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g856170.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Trihelix

Protein Properties

Length: 452aa MW: 51444 Da PI: 6.2447

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g856170.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75.4	9.1e-24	68	168	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessst 78 +Wt+ +v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ Pd.00g856170.m01 68 KWTDTMVRLLIMAVFYIGDEGGSEGtdptgkkksvggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVEN 160 7************999999965346677788999999********************************************55999999 PP trihelix 79 cpyfdqle 86 ++++++ Pd.00g856170.m01 161 QGLLEKMD 168 99999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MHQPQMVAYA HHDPDHPQHP HQSVKQGYPF ATKSKQIALS DDDEPGFGAD DNSNGDNKRK 60 ISPWQRMKWT DTMVRLLIMA VFYIGDEGGS EGTDPTGKKK SVGGLLQKKG KWKSVSRAMM 120 EKGFYVSPQQ CEDKFNDLNK RYKRVNDILG KGTACRVVEN QGLLEKMDLS PKMKEEVRKL 180 LNSKHLFFRE MCAYHNSCGH GTVGGVSNGA HNSPPEGATE PSEITAHQQQ PQQQRCFHSS 240 ENAHVVANSG RSETEASKMA KGGSGGEDED EDYEDDDSED EDEEEEEVVE VGPGSRGLMG 300 HGPHEDDDDN DDRASLKRPR KEGCFSEPSS SQLTHQLGCE VRGVLQDVSK SPWEKKQWLK 360 TRLIQLEEQQ VNYQYQAFEL EKQRLKWIKF SGKKERDMER AKLENERRRL ENERMLLLVR 420 KKELELLELH HQQQQQQQNS SNKRSDPSSL TG

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MHQPQMVAYA HHDPDHPQHP HQSVKQGYPF ATKSKQIALS DDDEPGFGAD DNSNGDNKRK  60
ISPWQRMKWT DTMVRLLIMA VFYIGDEGGS EGTDPTGKKK SVGGLLQKKG KWKSVSRAMM  120
EKGFYVSPQQ CEDKFNDLNK RYKRVNDILG KGTACRVVEN QGLLEKMDLS PKMKEEVRKL  180
LNSKHLFFRE MCAYHNSCGH GTVGGVSNGA HNSPPEGATE PSEITAHQQQ PQQQRCFHSS  240
ENAHVVANSG RSETEASKMA KGGSGGEDED EDYEDDDSED EDEEEEEVVE VGPGSRGLMG  300
HGPHEDDDDN DDRASLKRPR KEGCFSEPSS SQLTHQLGCE VRGVLQDVSK SPWEKKQWLK  360
TRLIQLEEQQ VNYQYQAFEL EKQRLKWIKF SGKKERDMER AKLENERRRL ENERMLLLVR  420
KKELELLELH HQQQQQQQNS SNKRSDPSSL TG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	4e-77	Trihelix family protein