PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g854700.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 285aa MW: 32118.7 Da PI: 7.0177 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 135.2 | 4.4e-42 | 4 | 139 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppGfrF Pt+eelv++yL++k+eg++ +++vi+ + i++++PwdLp+ +++++ ++w+fF++r++++a+g r++r t++gyWka Pd.00g854700.m01 4 LPPGFRFYPTEEELVSFYLQNKLEGRRddlnRVMDRVIPVLYINEYNPWDLPQfsgeACHGDPEQWFFFIPRQESEARGGRPRRLTTTGYWKA 96 79*************************665333344788899**********656655555777***************************** PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 tg+ v+s+ +++++glk+t+vfy+grap+g+kt+W m+ey+ Pd.00g854700.m01 97 TGSPSFVYSSnSNRAIGLKRTMVFYNGRAPHGRKTEWKMNEYK 139 ********9866778***************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MEELPPGFRF YPTEEELVSF YLQNKLEGRR DDLNRVMDRV IPVLYINEYN PWDLPQFSGE 60 ACHGDPEQWF FFIPRQESEA RGGRPRRLTT TGYWKATGSP SFVYSSNSNR AIGLKRTMVF 120 YNGRAPHGRK TEWKMNEYKA IEAHHADQNQ PLIASSSSNT PSAPTLRQEF SLCRVYKKSK 180 CLRAFDRRPL GVEIMSNPSL NLNQTAAAHE GAGHQGQGSA SHSRNPLMGS GQRTNSSSPE 240 SSSSGDHHGP QPPSQPAGET GTLPMFTDNE ALWDLEQLMI NDNWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 2e-63 | NAC family protein |