PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g854530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 371aa    MW: 41662.4 Da    PI: 6.8283
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g854530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3104.17.2e-331082091100
                       EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                       f+k ltpsdv+k++rlv+pk++ae++     g +  ++  l++edesg+sW+++++y+++s++yvltkGW+++vk+++L++gD+v+F++ +++
  Pd.00g854530.m01 108 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgwG-D--SGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFERRRSH 197
                       99**************************9754.3..4679************************************************88779 PP

                       EE..EEEEE-SS CS
                B3  89 efelvvkvfrks 100
                       + +l+++++r+s
  Pd.00g854530.m01 198 TDRLFIGWRRRS 209
                       999******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MSINHFSSDH PETQWWPNTA HQQQQDPSRP HFHPKFCQDT HHHNYQAWLN SQEQPTPMSP  60
IPPTPTTLNF NLNQNDAESD HANQLQHQLL LQSSPPLDDH DEENEPMFEK PLTPSDVGKL  120
NRLVIPKQHA EKYFPLGWGD SGLLLSFEDE SGKSWRFRYS YWNSSQSYVL TKGWSRYVKE  180
KRLDAGDVVL FERRRSHTDR LFIGWRRRSA AATPSAHDSG PGATQVSGGA GESSGSAGGW  240
TRMFYSAPQH NNNDGGSSYP AHQYRNHSVA PYPPECLHAA GSGVQSMSQT TSSVGSSKIL  300
RLFGVNLECQ QQADHESEPS TPDGSSSLSM SSSQGPIPHH HLYPRAAYDY GADQRDFSFS  360
RDGNPMRNRR G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.22e-57B3 family protein