PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g851720.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 628aa    MW: 69515.6 Da    PI: 5.9496
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g851720.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS439.52.3e-1342636271374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalklfsevsPil 91 
                       lv+lLl+cAeav+++d+ la+++L +l+  ++p gd+mqR+a++fteAL+arl+   +++  ++a +p +  + ns e l+++++ ++++P++
  Pd.00g851720.m01 263 LVHLLLACAEAVAKEDFMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLTAtlTTNPAASAPKPFSPFPPNSLEILKIYQIVYQACPYI 355
                       68****************************************************943333444444444444567****************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kf+h+taNqaI ea+e+eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+      e+++etg+ L+++A +l+vpfef++ v +
  Pd.00g851720.m01 356 KFAHFTANQAIFEAFESEERVHVIDLDILQGYQWPAFMQALAARPGGAPLLRITGVGP----CIEAVKETGRCLTELALSLHVPFEFHA-VGE 443
                       **********************************************************....***************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +ledl++++++ + gEalaVn v +lhr++       ++  +vL ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p+
  Pd.00g851720.m01 444 QLEDLKPHMFNRRIGEALAVNTVNRLHRVP------GNYLGNVLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPP 530
                       *****************************9......444557*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       +s +r+kvE+ ++++ei+n+vacegaer+erhe+lekWr+ +e+ GFk+v+ls +a++q k ll  ++ dgyr+ e++g+l+lgW+dr+++++
  Pd.00g851720.m01 531 DSAQRAKVEQYIFAPEIRNIVACEGAERTERHERLEKWRKVMESKGFKSVALSANAVTQSKILLGLYSCDGYRMTEDKGCLLLGWQDRSIMAA 623
                       ********************************************************************************************* PP

              GRAS 371 SaWr 374
                       SaWr
  Pd.00g851720.m01 624 SAWR 627
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    
MGSIKSEISC TSDLKPPSPN ESTTMSISMS ESKKTTTPPS SEMEQSSLTP PSLNFPTLKF  60
ELDGDVEVQS PDHSIWESLL FSEQFDTDFM VLSPVPNNML DSPQPGASLS AAHNNYNYYN  120
YAQSMQGQSL SGCSPPRFSP HLGAFSSTHN PKGKGLSPLR RVFNSPVNQY MQPADQNMQS  180
MPPASIEDFL DDYQRDSFIA AYQNPTTTTT TTSSSKMSGT SSQSYNPHDM PTSSTVPAAP  240
LDCLPMQNSS RFSRSEQDSG LQLVHLLLAC AEAVAKEDFM LARRYLHHLN RVVTPLGDSM  300
QRVASCFTEA LSARLTATLT TNPAASAPKP FSPFPPNSLE ILKIYQIVYQ ACPYIKFAHF  360
TANQAIFEAF ESEERVHVID LDILQGYQWP AFMQALAARP GGAPLLRITG VGPCIEAVKE  420
TGRCLTELAL SLHVPFEFHA VGEQLEDLKP HMFNRRIGEA LAVNTVNRLH RVPGNYLGNV  480
LAMIRDQAPN IVTLVEQEAS HNGPYFLGRF LEALHYYSAI FDSLDATFPP DSAQRAKVEQ  540
YIFAPEIRNI VACEGAERTE RHERLEKWRK VMESKGFKSV ALSANAVTQS KILLGLYSCD  600
GYRMTEDKGC LLLGWQDRSI MAASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.18e-89GRAS family protein