PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g842730.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 376aa    MW: 40472.4 Da    PI: 6.0692
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g842730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA542.3e-17279312134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  Pd.00g842730.m01 279 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 312
                       99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MEKGKKGGSE FEFKTKTQQD NFSETMIGPN FIDEIDCGSF FDTIDDLLDF PNDDVESGLG  60
PAPDCNAAFN NSLWPNQSGS LPAPNDAVFS AGNSASDLSA ELSVPIEDIV QLEWLSNFVE  120
DSFSGGSLTI NKPDSFINKD TSHHQFQTSS PISVLDSSSS CSGDKNVPQS PGPVAAPGKR  180
GRARSKRPRP ATFNPRPAIQ LISPASSVTE AEGPQAQPFL APKVPSDSEN FAESRPVIKI  240
PKQASGEQKK KKKLKVSLPL APLEGNQNSG PTQAAVRKCL HCEITKTPQW RAGPMGPKTL  300
CNACGVRYKS GRLFPEYRPA ASPTFVPSLH SNSHKKVLEM RTKGGELVVF GETATAMNET  360
PELIPNTNSS ISMDYM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1186190KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-46GATA family protein