PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g842140.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 479aa MW: 54518.7 Da PI: 6.4571 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.4 | 1.6e-18 | 209 | 255 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++v+q+G + W+ Ia++++ gR +kqc++rw+++l Pd.00g842140.m01 209 KGQWTIEEDRLLIQLVEQYGVRKWSHIAQMLP-GRIGKQCRERWHNHL 255 799*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 58.2 | 1.8e-18 | 261 | 303 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd++l++a+++ G++ W+ Ia++++ gRt++++k++w+ Pd.00g842140.m01 261 KDTWSEEEDKILIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 303 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 479 aa Download sequence |
MELNKLRENL ASQVPLLVPD NYMMKLYNMK DEFPFEASSS SSKGNYNYLQ DFHHLDHQFQ 60 VNGSSSNPMF GVQNPCFDPY NDTTYTYEAS TTDVKFYECK PHNAETNMGH GQVLDNFQSG 120 SGYLNFPAHT SNPLDHLMGS SHRSATNFLP LDYQDIKPMN FVVPDEVSCI NNTDQNGYYK 180 KFGMNGKSRV SALTRGSTYK GRKKSNVVKG QWTIEEDRLL IQLVEQYGVR KWSHIAQMLP 240 GRIGKQCRER WHNHLRPDIK KDTWSEEEDK ILIQAHAEIG NKWAEIAKRL PGRTENSIKN 300 HWNATKRRQY SKRKCRSKYP RGSLLQEYIK SLNLDSTGSS TGRQRKNKSG NNNATSPNNM 360 ASSSTKSHTQ QTQNNVGFSC ANDRLVPNHD FNEDPDFCFD DNMFQEGCSI DSLLDDIPCA 420 LVLGENNGDF DGKIMAQASV AADEEKDFEM EMQVDVGPVM ESSEVKKELD LVEMISQVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 1e-107 | MYB family protein |