PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g837640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 749aa    MW: 84174.9 Da    PI: 6.7549
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g837640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS335.97.2e-1033756951323
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d++ a++lL+++++++sp gd +qRla++++ +L+arla+++s++ykal +++ts    ++ l+a++l+  +sP+ k+
  Pd.00g837640.m01 375 LRTLLISCAQAVAADDHRSANELLKKVRQHSSPFGDGTQRLAHCLADGLEARLAGTGSQIYKALVSKRTS---AADFLKAHHLYLAASPFKKI 464
                       6789*************************************************************99999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+++ N++I++ +++++rvH+iDf+i +G+QWp+L+q ++ R++gpp+lRiTg++ p++g   +e++eetg+rLa +Ae+++vpfe+n+ +ak
  Pd.00g837640.m01 465 SNFVSNKTIMNLAQNATRVHVIDFGILYGFQWPTLIQRISWRDGGPPRLRITGIEFPQPGfrPAERVEETGRRLAAYAEKFNVPFEYNA-IAK 556
                       ***********************************************************9*****************************.7** PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       ++++++leeL+++++E+l+Vn+ ++ ++lldesv+++s+r++vL+l+++++P+++++   +   n++ F++rf eal ++s+lfd+le+ +pr
  Pd.00g837640.m01 557 NWDTIKLEELKIDRDEVLVVNFLYRGKNLLDESVAVDSPRNRVLDLIRRINPDLFIHGIVNGAFNAPFFVTRFREALFHFSSLFDMLETVVPR 649
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaG 323
                       e++er+ +E e++gre+ nv+aceg er+er et+++W+ r  +aG
  Pd.00g837640.m01 650 EDRERMLIETEIFGREALNVIACEGWERVERPETYKQWQVRNLRAG 695
                       ****************************************988888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 749 aa     Download sequence    
MDRRLRAFSD SVNGVQLGNR VLPILSHPNI VARSQFDSNT FLDNSYREFN NPQPVLTPNN  60
VSSYASVSPE DDSQEDCDFS DVVLKYINQM LMEEDMEDKT CMLQESLELQ AAEKSFYEVL  120
GKKYPPSPEL HQDYAIQYGE SPGDSFSGTG SNYITSTCNS GGYFSDNTLI QSPDGYLSQL  180
KGLPAYSISQ SRYGSSTRVS SLDGQVDFRN SLHMPDLNTE SQSVWQFKKG VEEASRFLPG  240
ETKLVVNLEA NGLSAQAPKV GTNGEVVKVE KKDEGEYSPS GSRGRKNLYR EDDDVEESRS  300
SKQAAVSTES TLRSELFDTV LLCSTGEGRE RLESLREALQ NGMSKSMPQN GQSKGSNGGK  360
GRGKKQTGKK EVVDLRTLLI SCAQAVAADD HRSANELLKK VRQHSSPFGD GTQRLAHCLA  420
DGLEARLAGT GSQIYKALVS KRTSAADFLK AHHLYLAASP FKKISNFVSN KTIMNLAQNA  480
TRVHVIDFGI LYGFQWPTLI QRISWRDGGP PRLRITGIEF PQPGFRPAER VEETGRRLAA  540
YAEKFNVPFE YNAIAKNWDT IKLEELKIDR DEVLVVNFLY RGKNLLDESV AVDSPRNRVL  600
DLIRRINPDL FIHGIVNGAF NAPFFVTRFR EALFHFSSLF DMLETVVPRE DRERMLIETE  660
IFGREALNVI ACEGWERVER PETYKQWQVR NLRAGDGRDE LSMPFLHGNL LKKLQKAQLL  720
VLVICFLAFW HSTKILERFK VKGVADFHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein