PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g837410.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 166aa MW: 18408 Da PI: 8.3676 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 56.6 | 5.6e-18 | 115 | 164 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+r +W + L e+F+ a++++ G ++AtPk+ile+m+ ++Lt+++v+SHLQ Pd.00g837410.m01 115 KKRCEWKKSLEEKFMLAITHI-GLDNATPKRILEFMNEPDLTIKNVASHLQ 164 689******************.***************************** PP | |||||||
2 | Myb_DNA-binding | 23 | 1.9e-07 | 117 | 165 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqk 46 r W + ++e++ a++ G + t+k+I + m+ +t k++ s++q Pd.00g837410.m01 117 RCEWKKSLEEKFMLAITHIGLDnaTPKRILEFMNePDLTIKNVASHLQV 165 568********************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MASKSVLIVA LLFSVLILCL QGTYADRIQG WEGGHARFYG GADAFAIIAG GGFGNGNWDS 60 QGYGFSSGSC YELKCDGGPK WCLTGDEEKQ EKRAKRGRKR SREGDDEERT AAPRKKRCEW 120 KKSLEEKFML AITHIGLDNA TPKRILEFMN EPDLTIKNVA SHLQVC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 117 | RKRSREGDDEERTAAPRKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07210.1 | 2e-17 | ARR-B family protein |