PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g837380.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 533aa MW: 59033.8 Da PI: 4.4271

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g837380.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	65.3	1.1e-20	52	102	3	54
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 r Wt L e+F++a+++ G e+AtPk+ile+m+ ++Lt+++v+SHLQkYR Pd.00g837380.m01 52 RWIWTISLREKFMQAIKHY-GLENATPKRILEFMDEPDLTIKNVASHLQKYR 102 789**************.9***************************** PP
2	Myb_DNA-binding	26.7	1.3e-08	55	102	4	48
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT + e++ +a+k +G + t+k+I + m +t k++ s++qky+ Pd.00g837380.m01 55 WTISLREKFMQAIKHYGLEnaTPKRILEFMDePDLTIKNVASHLQKYR 102 999********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MASKSVLIVA LLFSVLILCL QGTYAYQGGF GNGNRDSQGY GDDEERTAAP RRWIWTISLR 60 EKFMQAIKHY GLENATPKRI LEFMDEPDLT IKNVASHLQK YRKFLVKLKY AVVAGDEDMR 120 ERLSRSSFAR GHPELLFNNN ERDQPHSQLQ DQQLMEALFG STFQVQPSAG IGSTPPLTAA 180 ASNRHGSIQF SNDQQFSTSN ISRSIPPLIR SGQSSPLNNN PANFPLQQPT LGNRNGDQLF 240 FQENLPAAFG IQQPSNNFEN GGVSFDPMNN VGLTNNNIGT NNLMQVYPLQ SQPGTNNPFS 300 YNLATSVNQN GSNFTPMSSS FDNLGSHFND VNQFGVYWQS FGSAGFETGA SSAYQFPPNL 360 PNNKGDLDQQ QNVPVLPPPE GNFNDQCGLP NINVGGRNVE NSNRGFMNNT STVVSPPTLI 420 NNNNISHEQE SVSDSVISMM RHYLFTDEQD NYQPPSQQDG GHDQLPYQVE VPDPAANQIP 480 NPSADQVPNP GPYHVEDNAP NEILEPGMPT LFESEDDNTW FSYLSEHIWD ADT

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MASKSVLIVA LLFSVLILCL QGTYAYQGGF GNGNRDSQGY GDDEERTAAP RRWIWTISLR  60
EKFMQAIKHY GLENATPKRI LEFMDEPDLT IKNVASHLQK YRKFLVKLKY AVVAGDEDMR  120
ERLSRSSFAR GHPELLFNNN ERDQPHSQLQ DQQLMEALFG STFQVQPSAG IGSTPPLTAA  180
ASNRHGSIQF SNDQQFSTSN ISRSIPPLIR SGQSSPLNNN PANFPLQQPT LGNRNGDQLF  240
FQENLPAAFG IQQPSNNFEN GGVSFDPMNN VGLTNNNIGT NNLMQVYPLQ SQPGTNNPFS  300
YNLATSVNQN GSNFTPMSSS FDNLGSHFND VNQFGVYWQS FGSAGFETGA SSAYQFPPNL  360
PNNKGDLDQQ QNVPVLPPPE GNFNDQCGLP NINVGGRNVE NSNRGFMNNT STVVSPPTLI  420
NNNNISHEQE SVSDSVISMM RHYLFTDEQD NYQPPSQQDG GHDQLPYQVE VPDPAANQIP  480
NPSADQVPNP GPYHVEDNAP NEILEPGMPT LFESEDDNTW FSYLSEHIWD ADT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07210.1	8e-16	ARR-B family protein