PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g836040.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YB

Protein Properties

Length: 1060aa MW: 117090 Da PI: 5.3148

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g836040.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	183	2.4e-57	913	1009	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 vreqdr+lPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy++plkvyl++yr Pd.00g836040.m01 913 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLTRYR 1003 59*************************************************************************************** PP NF-YB 92 elegek 97 e+eg++ Pd.00g836040.m01 1004 EMEGDT 1009 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1060 aa Download sequence
MEISLLLFSL LLLIASSSAQ MPGFVSLDCG GEGVFTDDLG LEWTPDQLNY GATSLISVAN 60 DTRKQYSTLR HFPADSRKYC YTMNVTSRTR YLLRATFLYG NFDNNNVYPK FDISLGATHW 120 STIVISDATT IEMRELIFLA TSPTASVCLS NATTGQPFIS TLELRQFNGS VYYTDFEQQF 180 YLSVSARINF GADDEAPIRY PDDPFDRIWL SDSVKKANFL VDIADGTKKV STKLPIDVNR 240 DERPPEKVMQ TAVVGTNGSL TYRLNLDGFP GFGWAFTYFA EIEDLAPDES RKFRLVLPGN 300 PEVSKAIVNI EENAQGKYRL YEPGFTNLSL PFVLSFRFGK TSDSSNGPLL NAMEINKYLE 360 KNDGSQDGAV ISSFASHYSS ADWALEGGDP CLPVPWSWVE CNSDPQPRVV KIKLSSKNLT 420 GDIPSDLTKL SNLVELWLDG NSLTGPIPDF TGFVDLKIIH LENNQLTGGL PSSLTNLPSL 480 KELYVQNNML SGTVPLGLLN KVVLNYTGNV NLRKGKTSGI RVNIIIGTSV GAAVLVIVTI 540 VSCVFLRKGK KKYYDQDHQL GRPLPRQGLL SSKTDSAPTE AAHCFSYSEI EEATRNFEKK 600 IGSGGFGNVY YGRMKDEREI AVKVLTSNSY QGKREFSNEV TLLSRIHHRN LVQFLGYCQE 660 DGRSMLVYEF MHNGTLKEHL YGPLTREQSI NWIKRLEIAE DAAKVDGASH VSSIVRGTVG 720 YLDPEYYISQ QLTDKSDVYS FGVILLELIS GQEAISNENF GVNCRNIVQW AKLHIESGDI 780 QGIIDPSLHG EYDIQSMWKI AEKALMCVQA HGFMRPSISE VLKEIQDAIS MERDAGAARD 840 GTSDASRNSI LSSLNLGSMD LGGTDNFLSI DESIARPTAR PLNINRVSMA EAPGSPGGGS 900 HESGGDQSPR SNVREQDRYL PIANISRIMK KALPANGKIA KDAKETVQEC VSEFISFITS 960 EASDKCQREK RKTINGDDLL WAMATLGFED YIDPLKVYLT RYREMEGDTK GSGKGGDSSS 1020 KKDAQPSSNA QISRQGSFSQ GGNYSNSQSQ HMMVPMQGTE

Sequence ? help Back to Top

Protein Sequence Length: 1060 aa Download sequence

MEISLLLFSL LLLIASSSAQ MPGFVSLDCG GEGVFTDDLG LEWTPDQLNY GATSLISVAN  60
DTRKQYSTLR HFPADSRKYC YTMNVTSRTR YLLRATFLYG NFDNNNVYPK FDISLGATHW  120
STIVISDATT IEMRELIFLA TSPTASVCLS NATTGQPFIS TLELRQFNGS VYYTDFEQQF  180
YLSVSARINF GADDEAPIRY PDDPFDRIWL SDSVKKANFL VDIADGTKKV STKLPIDVNR  240
DERPPEKVMQ TAVVGTNGSL TYRLNLDGFP GFGWAFTYFA EIEDLAPDES RKFRLVLPGN  300
PEVSKAIVNI EENAQGKYRL YEPGFTNLSL PFVLSFRFGK TSDSSNGPLL NAMEINKYLE  360
KNDGSQDGAV ISSFASHYSS ADWALEGGDP CLPVPWSWVE CNSDPQPRVV KIKLSSKNLT  420
GDIPSDLTKL SNLVELWLDG NSLTGPIPDF TGFVDLKIIH LENNQLTGGL PSSLTNLPSL  480
KELYVQNNML SGTVPLGLLN KVVLNYTGNV NLRKGKTSGI RVNIIIGTSV GAAVLVIVTI  540
VSCVFLRKGK KKYYDQDHQL GRPLPRQGLL SSKTDSAPTE AAHCFSYSEI EEATRNFEKK  600
IGSGGFGNVY YGRMKDEREI AVKVLTSNSY QGKREFSNEV TLLSRIHHRN LVQFLGYCQE  660
DGRSMLVYEF MHNGTLKEHL YGPLTREQSI NWIKRLEIAE DAAKVDGASH VSSIVRGTVG  720
YLDPEYYISQ QLTDKSDVYS FGVILLELIS GQEAISNENF GVNCRNIVQW AKLHIESGDI  780
QGIIDPSLHG EYDIQSMWKI AEKALMCVQA HGFMRPSISE VLKEIQDAIS MERDAGAARD  840
GTSDASRNSI LSSLNLGSMD LGGTDNFLSI DESIARPTAR PLNINRVSMA EAPGSPGGGS  900
HESGGDQSPR SNVREQDRYL PIANISRIMK KALPANGKIA KDAKETVQEC VSEFISFITS  960
EASDKCQREK RKTINGDDLL WAMATLGFED YIDPLKVYLT RYREMEGDTK GSGKGGDSSS  1020
KKDAQPSSNA QISRQGSFSQ GGNYSNSQSQ HMMVPMQGTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	1e-65	NF-YB family protein