PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g832570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 333aa    MW: 36974.1 Da    PI: 5.5917
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g832570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.45e-127132438374
              GRAS  38 mqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlq 130
                       m+++a+yf+eALa+r++r        + p+++ +++ s+ l++   f+e++P+lkf+h+taNqaIlea+++++rvH+iDf+++qG+QWpaL+q
  Pd.00g832570.m01   1 MRKVATYFAEALARRIYR--------IYPQDSLDSSYSDILQM--HFYETCPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQ 83 
                       79****************........44555554445555444..5*********************************************** PP

              GRAS 131 aLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp..gEalaVnlvlqlhrlldesvsle 221
                       aLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +va++l+dle+++L+++p   E++aVn+ ++lh ll++++++e
  Pd.00g832570.m01  84 ALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVANSLADLEPSMLEIRPpdVETVAVNSCFELHPLLARPGAVE 176
                       ********************************************************************999********************** PP

              GRAS 222 serdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlek 314
                       +    vL+ +k ++Pk+v++veqea+hn++ Fl+rf eal+yys lfdsle +  +  +++ ++++++lgr+i+nvvaceg++r+erhetl +
  Pd.00g832570.m01 177 K----VLSSIKAMKPKIVTIVEQEANHNGPIFLDRFNEALHYYSNLFDSLEGS--SGPSQDLVMSEVYLGRQICNVVACEGQDRVERHETLTQ 263
                       *....*********************************************999..566999******************************** PP

              GRAS 315 WrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       Wr r+++aGF  v+l+++a kqa++ll+ ++ +dgyrvee+sgsl+lgW++rpL+++SaW+
  Pd.00g832570.m01 264 WRGRMDSAGFDLVHLGSNAFKQASMLLALFAgGDGYRVEENSGSLMLGWHTRPLIATSAWQ 324
                       ************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MRKVATYFAE ALARRIYRIY PQDSLDSSYS DILQMHFYET CPYLKFAHFT ANQAILEAFA  60
TASRVHVIDF GLKQGMQWPA LMQALALRPG GPPAFRLTGI GPPQPDNTDA LQQVGWKLAQ  120
LAETIGVEFE FRGFVANSLA DLEPSMLEIR PPDVETVAVN SCFELHPLLA RPGAVEKVLS  180
SIKAMKPKIV TIVEQEANHN GPIFLDRFNE ALHYYSNLFD SLEGSSGPSQ DLVMSEVYLG  240
RQICNVVACE GQDRVERHET LTQWRGRMDS AGFDLVHLGS NAFKQASMLL ALFAGGDGYR  300
VEENSGSLML GWHTRPLIAT SAWQLASSTE STR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein