PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g827300.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 371aa MW: 40742.4 Da PI: 6.6219 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+ Ed +l+ +v ++G g+W++++++ g++R++k+c++rw +yl Pd.00g827300.m01 14 RGIWTAAEDAKLLAYVSKHGVGNWTLVPKKAGLNRCGKSCRLRWTNYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.9 | 6.5e-15 | 69 | 110 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E+e ++++++ G++ W+ Ia+ ++ gRt++++k++w++ Pd.00g827300.m01 69 SFTPQEEEHIINLHEAIGSR-WSHIAKLLP-GRTDNDVKNYWNT 110 79******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MGRPPCCDKS NVKRGIWTAA EDAKLLAYVS KHGVGNWTLV PKKAGLNRCG KSCRLRWTNY 60 LRPDLKHDSF TPQEEEHIIN LHEAIGSRWS HIAKLLPGRT DNDVKNYWNT KLKKKLSKMG 120 IDPVTHKPFS QILSDYGNIS SLPSIDNQFG FFFKNSNNTF VPKSEPSSGI TGLPLGVNTY 180 SNMMMNPIGS DNSTASTLSL GIVAQFQEIN QDCVQVQPHF LNEVASSCSS SSSPHATDHQ 240 LSSQQTYLCQ QSLHEAQITP SSSFNWSEFL LHDPFSSADK LKQEQDFHGI MMSSSSAIPT 300 LAGGSEHNLN ATTQASDFGS SAINIGGQRN NNLAHDQASS SSMTSFVDTI LGQDSEMQAA 360 FPELLDASFD Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 3e-85 | MYB family protein |