PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g826600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 367aa    MW: 42519.8 Da    PI: 4.4651
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g826600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.81.8e-18101493128
               NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 
                        GfrF+Ptd+e++  +L k v +k+      + ++vi+++++  +k eP+++ + + +   +++++yf s+ ++   +g r +r+t +g+W++
  Pd.00g826600.m01  10 LGFRFRPTDQEIIGSFLYKMVVEKRpltsmPPYNKVIHRCNLfgNKREPSEIWRDYGGdqlKDQDLYFVSELQR---NGLRIQRKTGRGTWSE 99 
                       6*******************9999888886666678****9833577*****7533222236668888888766...799************* PP

               NAM  86 tgkdkevlsk......kgel....vglkktLvfykgrapkgektdWvmheyrl 128
                       t + ++v+++      k       +g k+ + + +g++++  ++ W+++ey+l
  Pd.00g826600.m01 100 TETYQNVKDEvdeingK--SnldaIGRKRKFRYENGNTSE-DHAGWLLDEYSL 149
                       ********987777551..14566*********9988888.89********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MANSGVTQLL GFRFRPTDQE IIGSFLYKMV VEKRPLTSMP PYNKVIHRCN LFGNKREPSE  60
IWRDYGGDQL KDQDLYFVSE LQRNGLRIQR KTGRGTWSET ETYQNVKDEV DEINGKSNLD  120
AIGRKRKFRY ENGNTSEDHA GWLLDEYSLF KKACKNGTSS NCYDFDVVIC RLRKKGNMDK  180
SGKKRKCSSQ DQSNKKMKRD QSTKEMKTEN SEGPQIMNDE RNQSMTNDST TYDPEYLIDT  240
NYKSFDIDEL FAELDREPPL LHSQQLPEIV ESQEEPCVNQ FDGPVDAATS NLSNFEYNFD  300
ELAGLIWNAD DHEDPNLFFE VDELLAEDAE PLSTSELDDV YNMVSQPLDQ NSYRSNSFMD  360
QNYNSYT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173198RKKGNMDKSGKKRKCSSQDQSNKKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.22e-11NAC family protein