PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g823800.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Whirly | ||||||||
Protein Properties | Length: 278aa MW: 30543.7 Da PI: 10.1527 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 216.9 | 1.9e-67 | 101 | 239 | 1 | 139 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrka 93 s+yk+kaal+v++++p+f+aldsg++kl+r+G++ll++a+a+++r ydW++kq+f+ls+te+++lv l+skes effhdp++++s+eGkvrk+ Pd.00g823800.m01 101 SIYKGKAALTVEPKAPEFTALDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVCLGSKESIEFFHDPFKGKSDEGKVRKV 193 7******************************************************************************************** PP Whirly 94 lkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 lkvePlpdGsG+f+nlsv+n+l++ +es+++P+++aefavl+s+++ Pd.00g823800.m01 194 LKVEPLPDGSGHFFNLSVQNKLINLDESVYIPITRAEFAVLKSAFN 239 *******************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MLRLHSLSSP AVAAQNPNQN PKQCLASELS SRARVFSTNS FGFAPSLSSS RKRLSLKCRQ 60 SEYFDQQRAS TASAPNKPSP PAPQTPAGGT GLPPRFFVGH SIYKGKAALT VEPKAPEFTA 120 LDSGAFKLSR EGFVLLQFAP AAGVRVYDWS RKQVFSLSVT EIGSLVCLGS KESIEFFHDP 180 FKGKSDEGKV RKVLKVEPLP DGSGHFFNLS VQNKLINLDE SVYIPITRAE FAVLKSAFNF 240 ILPYILGWHA YANSIKPEDS SRMNNSSSRY GGDFEWSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 1e-118 | Whirly family protein |