PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g818820.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 347aa MW: 39420.4 Da PI: 9.2081

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g818820.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.7	4.8e-12	15	50	1	37
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37 rg W + Ede+l ++v+q+G +W++Ia++++ gR++ Pd.00g818820.m01 15 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSD 50 899***************************.97 PP
2	Myb_DNA-binding	58.8	1.2e-18	55	98	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ Pd.00g818820.m01 55 RRPFSEEEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 98 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MDEYGDEAKS TTCPRGHWRP AEDEKLRQLV EQYGAQNWNS IAEKLQGRSD PRINRRPFSE 60 EEEERLLAAH RIHGNKWALI ARLFPGRTDN AVKNHWHVIM ARRQREQSKV CGKRSYQDFC 120 NDHSSNTSSI SNNFDVNRKF KSQGELRSSS SIGFDQNSST KFFEFRNPNK DRTTMFMDSR 180 HASSSPYNWN FATMSTTSNN AASSSVGLLG RERRDYFNNV SSNNISGCSK GSDHQFVHRR 240 NNPTTSSFMY GSYIGSASAF GLPNYKRVNV PSPFGCLGLG DHINRPEQHG RTFKKELANF 300 CDNASTLAKW RVAATAKFGD HDCQDHESID HHKETPFIDF LGVGISS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MDEYGDEAKS TTCPRGHWRP AEDEKLRQLV EQYGAQNWNS IAEKLQGRSD PRINRRPFSE  60
EEEERLLAAH RIHGNKWALI ARLFPGRTDN AVKNHWHVIM ARRQREQSKV CGKRSYQDFC  120
NDHSSNTSSI SNNFDVNRKF KSQGELRSSS SIGFDQNSST KFFEFRNPNK DRTTMFMDSR  180
HASSSPYNWN FATMSTTSNN AASSSVGLLG RERRDYFNNV SSNNISGCSK GSDHQFVHRR  240
NNPTTSSFMY GSYIGSASAF GLPNYKRVNV PSPFGCLGLG DHINRPEQHG RTFKKELANF  300
CDNASTLAKW RVAATAKFGD HDCQDHESID HHKETPFIDF LGVGISS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	1e-48	MYB family protein