PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g815790.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 981aa MW: 109032 Da PI: 9.4564

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g815790.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.2	2.1e-06	65	121	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +eL++ g+t +qV+ +F +R + +k Pd.00g815790.m01 65 KRPRDLLNPKAIKYMQSVFSIKDAISKKESRELSALFGVTGTQVRDFFNSQRSRVRK 121 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 981 aa Download sequence
MEDLSEMKIG SSVESFQKFL DSQRQLFHSQ IDQLQKVVVT QCNLTGVNPL SQEMAAGALS 60 VKIGKRPRDL LNPKAIKYMQ SVFSIKDAIS KKESRELSAL FGVTGTQVRD FFNSQRSRVR 120 KLVQLSREKA TRSSEHKELL DGVSTSSDPL TPIDLVPLNS VGPNSVEDAP SCSTQDDALS 180 GLDDLDKHFV DNIFNLMRKE ETFSGQVKLM EWILQIQNSS VLCWFLNTGG VMILATWLSQ 240 AAIEEQTSVL LVILKVLCHL PLHKALPVHM SAILQSVNRL RFYRTADVSN RARVLLSRWS 300 KLLARIQNMK KPNGMKTSSD SQHELVMLKQ SIDEVMGDES WKSNIDIPED IFATPFENAE 360 NSRRSEASEP LKLLTASSDE SNKKQILGVS SSQFRARRKV QLVEQPGQKS AGRSVQVTRA 420 TPVSKGRPMS ADDIQKAKMR AQFMQSKYGK SGSSNENKEL KTEGGNKLST SQASILPVVP 480 KVPVRPDIEE PKKPVTLLLK ERETPNRVET SLAPKLRMDL KESILEKCQR IRVLWKTPPE 540 IKLDPEWRVG GGENGKEIEV QRNRNRREKE TIYQRVQEIP SNPKEPWDIE MDYDDSLTPE 600 IPIEQPPDAD GTETQASLSR EGNNAQAWVT SSQGVNSAAS LAPALSQMNG ASAAAEPDLE 660 LLAVLLKNPE LVFALTSGQA ANLSSEDTVK LLDMIKSGGA GNLNGLGRKM EQRVEVSLPS 720 PTPSSNPGTS GWRADAGRNA FPQQMATTNN SLVSSAVHMI PSQRLSTSQP AVPSYSPDYF 780 PPSMQTPAAS EMVLTMKNTH LNNLSNSYNV AERQPNSFPP PLVSTPARQQ RQPQQLQQPR 840 FSEPRLPTHM YPSKPQMGKP GPPPPPPPPS ESWRARQDVP SNYRYLENQN QYNASYGGPS 900 QQPQLLPGPS WEGNEHVGGN QDFESWSPDN SPTRNPGYMY GREPRMNPAR DYMPGRSRQM 960 NPSGYGGQNR LGNRWPDRGR Q

Sequence ? help Back to Top

Protein Sequence Length: 981 aa Download sequence

MEDLSEMKIG SSVESFQKFL DSQRQLFHSQ IDQLQKVVVT QCNLTGVNPL SQEMAAGALS  60
VKIGKRPRDL LNPKAIKYMQ SVFSIKDAIS KKESRELSAL FGVTGTQVRD FFNSQRSRVR  120
KLVQLSREKA TRSSEHKELL DGVSTSSDPL TPIDLVPLNS VGPNSVEDAP SCSTQDDALS  180
GLDDLDKHFV DNIFNLMRKE ETFSGQVKLM EWILQIQNSS VLCWFLNTGG VMILATWLSQ  240
AAIEEQTSVL LVILKVLCHL PLHKALPVHM SAILQSVNRL RFYRTADVSN RARVLLSRWS  300
KLLARIQNMK KPNGMKTSSD SQHELVMLKQ SIDEVMGDES WKSNIDIPED IFATPFENAE  360
NSRRSEASEP LKLLTASSDE SNKKQILGVS SSQFRARRKV QLVEQPGQKS AGRSVQVTRA  420
TPVSKGRPMS ADDIQKAKMR AQFMQSKYGK SGSSNENKEL KTEGGNKLST SQASILPVVP  480
KVPVRPDIEE PKKPVTLLLK ERETPNRVET SLAPKLRMDL KESILEKCQR IRVLWKTPPE  540
IKLDPEWRVG GGENGKEIEV QRNRNRREKE TIYQRVQEIP SNPKEPWDIE MDYDDSLTPE  600
IPIEQPPDAD GTETQASLSR EGNNAQAWVT SSQGVNSAAS LAPALSQMNG ASAAAEPDLE  660
LLAVLLKNPE LVFALTSGQA ANLSSEDTVK LLDMIKSGGA GNLNGLGRKM EQRVEVSLPS  720
PTPSSNPGTS GWRADAGRNA FPQQMATTNN SLVSSAVHMI PSQRLSTSQP AVPSYSPDYF  780
PPSMQTPAAS EMVLTMKNTH LNNLSNSYNV AERQPNSFPP PLVSTPARQQ RQPQQLQQPR  840
FSEPRLPTHM YPSKPQMGKP GPPPPPPPPS ESWRARQDVP SNYRYLENQN QYNASYGGPS  900
QQPQLLPGPS WEGNEHVGGN QDFESWSPDN SPTRNPGYMY GREPRMNPAR DYMPGRSRQM  960
NPSGYGGQNR LGNRWPDRGR Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein