PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g813460.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 791aa MW: 86732.7 Da PI: 5.7968

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g813460.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.8	6.9e-16	493	531	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk Pd.00g813460.m01 493 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 531 689**********************************96 PP
2	TCR	50.5	4e-16	579	617	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN Pd.00g813460.m01 579 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 617 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 791 aa Download sequence
MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV 60 SAHKESRFLR RHNTSDPSKP ESSLESGNKV SANEDPAQLY INSEELREDC VPGVSTGEDS 120 VEPSSEHSKF VIELPRNLKY DCGSPDCRPT TSCGTEAHCE LEVADLSAPL VPYVQKTSEE 180 GSSNDEAHLQ IICQTLQRKE GTGCDWESLI SDAADLLIFD SPNGTEAFKG LMQNSLDPAT 240 RFCTSLAPQL TQNDVNDEQN VQVLDIVGSG GQLETEDPSS QYGEASQLER TEQMEDHLNN 300 CMVSSQSEKE DNTVETPMQF NCKPAVLNLQ RGLRRRCLDF EMAGARRKSL DNVSNSSSNM 360 LSQSDEKITT NDKQLVPMKP GGESSRCILP GIGLHLNALA KTSKDYKIIK CESLAYGRQL 420 SLPNSTADTG GQGPGHESFS SASSERDMDG TENGVQLAHD ASQEPAFLAN EEFNQNSPKK 480 KRRRFEHAGE TESCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCQECFNK PIHEDTVLAT 540 RKQIESRNPL AFAPKVIRSS DSVPELGQEE SSKTPASARH KRGCNCKKSS CLKKYCECYQ 600 GGVGCSISCR CEGCKNAFGR KDGSFIGTEA ELDEEEAEAC EKSVAEKHQQ KIEIQKNEEQ 660 RLDSALPTTP LRLSRQMVSL PFSSKNKPPR SSVFSIGGSS SGLYTSQKLG KPNILRPESK 720 FERHSQTVPE DEMPEILQGD GSPSTGVKTA SPNSKRVCPP NSDFGPSPGR RTGRKLILQS 780 IPSFPSLTPQ H

Sequence ? help Back to Top

Protein Sequence Length: 791 aa Download sequence

MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV  60
SAHKESRFLR RHNTSDPSKP ESSLESGNKV SANEDPAQLY INSEELREDC VPGVSTGEDS  120
VEPSSEHSKF VIELPRNLKY DCGSPDCRPT TSCGTEAHCE LEVADLSAPL VPYVQKTSEE  180
GSSNDEAHLQ IICQTLQRKE GTGCDWESLI SDAADLLIFD SPNGTEAFKG LMQNSLDPAT  240
RFCTSLAPQL TQNDVNDEQN VQVLDIVGSG GQLETEDPSS QYGEASQLER TEQMEDHLNN  300
CMVSSQSEKE DNTVETPMQF NCKPAVLNLQ RGLRRRCLDF EMAGARRKSL DNVSNSSSNM  360
LSQSDEKITT NDKQLVPMKP GGESSRCILP GIGLHLNALA KTSKDYKIIK CESLAYGRQL  420
SLPNSTADTG GQGPGHESFS SASSERDMDG TENGVQLAHD ASQEPAFLAN EEFNQNSPKK  480
KRRRFEHAGE TESCKRCNCK KSKCLKLYCE CFAAGVYCIE PCSCQECFNK PIHEDTVLAT  540
RKQIESRNPL AFAPKVIRSS DSVPELGQEE SSKTPASARH KRGCNCKKSS CLKKYCECYQ  600
GGVGCSISCR CEGCKNAFGR KDGSFIGTEA ELDEEEAEAC EKSVAEKHQQ KIEIQKNEEQ  660
RLDSALPTTP LRLSRQMVSL PFSSKNKPPR SSVFSIGGSS SGLYTSQKLG KPNILRPESK  720
FERHSQTVPE DEMPEILQGD GSPSTGVKTA SPNSKRVCPP NSDFGPSPGR RTGRKLILQS  780
IPSFPSLTPQ H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	479	484	KKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-143	CPP family protein