PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g808740.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Trihelix | ||||||||
Protein Properties | Length: 551aa MW: 62692.9 Da PI: 7.1497 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 95 | 7.2e-30 | 104 | 189 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+ ++++++++++k+plW+evs+ m +e+g++rs k+Ckek+enl k+ykk+keg+ +r ++ +++++f+qlea Pd.00g808740.m01 104 RWPRQETLTLLEIRSGLDSKFKETNQKGPLWDEVSRIMgEEHGYQRSGKKCKEKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 189 8*************************************99******************************98..55667*******85 PP | |||||||
2 | trihelix | 54.1 | 4.2e-17 | 401 | 481 | 1 | 80 |
trihelix 1 rWtkqevlaLie.arremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 rWt++ev Lie +r+++e ++++ g+ k++lWee+++km g++rs +Ckekwen++ + ++e +kk++++++ Pd.00g808740.m01 401 RWTEHEVASLIElIRTSLELTIQDcGCFKEGLWEEIAAKMGCLGYRRSVGECKEKWENMSVFPRMTAECNKKHKQDAK-ANM 481 8***********446678888887799*********************************999999999999955544.333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 551 aa Download sequence |
MASRTQFCTT SQFQEPFSAH GNLTAQPNYQ PMLVPAGGLV DHLHPPHYST IINGCGAAHP 60 PNAAATTSSA AALYGIDLEH GHGWNNNINV GMNAADGGNN MNYRWPRQET LTLLEIRSGL 120 DSKFKETNQK GPLWDEVSRI MGEEHGYQRS GKKCKEKFEN LYKYYKKTKE GKAGRQDGKH 180 YRFFRQLEAI YGDQTSNQSS TYGRLNPRLY HHTTPNDTVN PKNQEVVQDQ KHISCESLSF 240 SNNSTEFDQT SSSENNDDDL SISAIDYFMM NQSMGSLKNE KQSCARPINK KSWKAKVEDF 300 VNSQIGKVIN TQEAWMEKML KSIEHREEER IAQEEEWRKQ QAAKFDREVH KFWAKERAWV 360 ESRDAAIMEA LGTFSRPGIS NHDKDKDDIS KLQIPNDTIN RWTEHEVASL IELIRTSLEL 420 TIQDCGCFKE GLWEEIAAKM GCLGYRRSVG ECKEKWENMS VFPRMTAECN KKHKQDAKAN 480 MYHGQLSCYE GQQEVSKRRP DGMGLQLMDG GLSPSSSNMD VSSSSFHMQF NGGENLWDRY 540 GTVKLSKGKN Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 2e-85 | Trihelix family protein |