PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g806610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 685aa MW: 74705 Da PI: 5.3323

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g806610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	508	553	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L Pd.00g806610.m01 508 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 553 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MTDYRIPPTM NLWTDDNASL MEAFMSSSDL TSFWAAPSAQ PTPQPAHPQA QPQSSASTSD 60 YPKAAAVAPS QPSITPFNQE TLMQRLQALI EGARESWTYA IFWQSSYDYS GGTVLGWGEG 120 FYKDERDKGK AKAKTTTSAA DQEYRKKVLR ELNSLISGAD TSADDAVVDQ EVTDTEWFFL 180 VSMTQSFVPG GGLPGQAFFH STPVWVAGPD RLAASHCERA RQGQAFGLQT LVCVPTANGV 240 VELGSTELIY QSSDLTNKVR VLFNFNNLEV GSWPMGGGGA DQGENDPSSL WINDPSSTTI 300 EVKDPVNMAP VTSAPTSTST QPVSKPIQFE SHQPSSSSLS ENPSAIQLQQ SQQQVQQQTQ 360 SFFTRELNFS DYGYDGSSVK NSNSNSLKPE SGEILSFGES KRSSYSANGK LFSGHSQIAA 420 AEDNNSKKKK SPPSRGSNDE GLLSFSSGVI LPSSGVVKSG GGGAADSDHS DLEASVVRET 480 DSSRVVDPEK RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNVSKMDKA 540 SLLGDAISYI NELKAKLQTV ESDKEDLQKQ LESMNQDLGC KDSSSLSDQD LKMSKHQASS 600 KLIDLDIDVK IIGWDAMIRI QCCKKNHPAA RLMASLKELD LDVHHASISV VNDLMIQQAT 660 VKMGSRIYTQ DQLRLALSSK IGDSW

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MTDYRIPPTM NLWTDDNASL MEAFMSSSDL TSFWAAPSAQ PTPQPAHPQA QPQSSASTSD  60
YPKAAAVAPS QPSITPFNQE TLMQRLQALI EGARESWTYA IFWQSSYDYS GGTVLGWGEG  120
FYKDERDKGK AKAKTTTSAA DQEYRKKVLR ELNSLISGAD TSADDAVVDQ EVTDTEWFFL  180
VSMTQSFVPG GGLPGQAFFH STPVWVAGPD RLAASHCERA RQGQAFGLQT LVCVPTANGV  240
VELGSTELIY QSSDLTNKVR VLFNFNNLEV GSWPMGGGGA DQGENDPSSL WINDPSSTTI  300
EVKDPVNMAP VTSAPTSTST QPVSKPIQFE SHQPSSSSLS ENPSAIQLQQ SQQQVQQQTQ  360
SFFTRELNFS DYGYDGSSVK NSNSNSLKPE SGEILSFGES KRSSYSANGK LFSGHSQIAA  420
AEDNNSKKKK SPPSRGSNDE GLLSFSSGVI LPSSGVVKSG GGGAADSDHS DLEASVVRET  480
DSSRVVDPEK RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNVSKMDKA  540
SLLGDAISYI NELKAKLQTV ESDKEDLQKQ LESMNQDLGC KDSSSLSDQD LKMSKHQASS  600
KLIDLDIDVK IIGWDAMIRI QCCKKNHPAA RLMASLKELD LDVHHASISV VNDLMIQQAT  660
VKMGSRIYTQ DQLRLALSSK IGDSW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	490	498	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein