PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g805090.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRF | ||||||||
Protein Properties | Length: 336aa MW: 37028.4 Da PI: 9.0318 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 72.8 | 4e-23 | 76 | 120 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH++rgr rsrk +e+ Pd.00g805090.m01 76 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMNRGRYRSRKLVES 120 79***************************************9986 PP | |||||||
2 | QLQ | 50.4 | 6.9e-18 | 14 | 48 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT aQ++++++Q+l++KyL a++PvPp+Ll +i+ Pd.00g805090.m01 14 PFTVAQWAEMEHQALIFKYLKAGLPVPPDLLGPIR 48 9******************************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MSGSSVGNGG HAPPFTVAQW AEMEHQALIF KYLKAGLPVP PDLLGPIRTS FNLISSNFLR 60 HHPTLGYTSY CGKKIDPEPG RCRRTDGKKW RCSKDAHPDS KYCERHMNRG RYRSRKLVES 120 QTTSQSSSTV TSDSVIGSSS HSGSFQNMPL HSMVNSGGLC FGSNVSQLKM EPIPYGIGNS 180 GNRGRSGAEE HNFMSEPSGS VRCLGMDSTV DSPWHLMVPR VSLKSEPKNC SLLLNNSSQL 240 QTLQHTEPLT VDTAITKQQQ HQYVGGQFGF PGSLKHEQNS LQPFFDEWPK SRDLGFHLSD 300 HRSTNTLTAT QLSMSNTMAP TKFFARSADS PTDAYT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 8e-41 | GRF family protein |