PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g798750.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 241aa MW: 27254.3 Da PI: 10.0624 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 41.3 | 3.7e-13 | 2 | 30 | 30 | 59 |
ZF-HD_dimer 30 psegeegtaaalkCaACgCHRnFHRrevee 59 ps gee ++alkCaAC+CHRnFHR+e e Pd.00g798750.m01 2 PS-GEEDIPEALKCAACECHRNFHRKEIEG 30 55.666789*****************9875 PP | |||||||
2 | Homeobox | 14.7 | 5.3e-05 | 122 | 182 | 1 | 57 |
TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r Rt+f++eq e + e+ e k + +++e ++L +++g++ ++ kvW +N ++ +kk Pd.00g798750.m01 122 KRFRTKFSQEQKEKMMEVAEklgwKIQRHDEQEVQKLCSEVGIKRQVFKVWMHNNKQAMKK 182 789*************99996766688899***************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MPSGEEDIPE ALKCAACECH RNFHRKEIEG DHLPNNYYVV NHQKHTISRR DSETRVLQLP 60 PPPPPPVHHS AAGGPVPPMM MAFGGGGGGG GGADESSSED LNMNNLFRAT YAAGQQAAGS 120 KKRFRTKFSQ EQKEKMMEVA EKLGWKIQRH DEQEVQKLCS EVGIKRQVFK VWMHNNKQAM 180 KKKQINKLSR SLILSFWRCV FINIVWVITV TSAIYFQTKA SSPIIYTYSK SPADNLRRKI 240 M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18350.1 | 9e-39 | ZF-HD family protein |