PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g791050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 370aa MW: 41325.9 Da PI: 6.799

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g791050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	106.6	1.2e-33	108	209	1	100
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k ltpsdv+k++rlv+pk++ae++ gg+ ++ l++edesg+sW+++++y+++s++yvltkGW+++vk+++L++gD+v+F++ ++++ Pd.00g791050.m01 108 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgGGD--SGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFERRRSHT 198 99*************************7666..6679********************************************887799 PP E..EEEEE-SS CS B3 90 felvvkvfrks 100 +l+++++r+s Pd.00g791050.m01 199 DRLFIGWRRRS 209 99****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MSINHFSSDH PETQWWPNTA HQQQQDPSRP HFLPQFCQDT HHHNYQAWLN SQEQPTPMSP 60 TPPTPTTLNF NLNQNDAESD HANQLQHQLL LQSSPPLDDH DEENEPMFEK PLTPSDVGKL 120 NRLVIPKQHA EKYFPLGGGD SGLLLSFEDE SGKSWRFRYS YWNSSQSYVL TKGWSRYVKE 180 KRLDAGDVVL FERRRSHTDR LFIGWRRRSA AATPSAHDSG PGSTQVSGGA GGSGSAGGWT 240 RMFYSAPQHN NNDGGSSYPA HQYRNHSVAP YPPDCLHAAG SGVQSMSQTT SSVGSSKILR 300 LFGVNLECQQ QADHESEPST PDGSSSLSMS SSQGPTPHHH LYPRAAYDFA ADQRDFSFSR 360 DGNPMRNRRG

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MSINHFSSDH PETQWWPNTA HQQQQDPSRP HFLPQFCQDT HHHNYQAWLN SQEQPTPMSP  60
TPPTPTTLNF NLNQNDAESD HANQLQHQLL LQSSPPLDDH DEENEPMFEK PLTPSDVGKL  120
NRLVIPKQHA EKYFPLGGGD SGLLLSFEDE SGKSWRFRYS YWNSSQSYVL TKGWSRYVKE  180
KRLDAGDVVL FERRRSHTDR LFIGWRRRSA AATPSAHDSG PGSTQVSGGA GGSGSAGGWT  240
RMFYSAPQHN NNDGGSSYPA HQYRNHSVAP YPPDCLHAAG SGVQSMSQTT SSVGSSKILR  300
LFGVNLECQQ QADHESEPST PDGSSSLSMS SSQGPTPHHH LYPRAAYDFA ADQRDFSFSR  360
DGNPMRNRRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	2e-52	B3 family protein