PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g783150.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 502aa MW: 55754.3 Da PI: 7.5761

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g783150.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.4e-17	147	196	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Pd.00g783150.m02 147 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 196 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MWDLNDSPDQ RPRGDESEGC SSQKTSADGD EEKGKRLAKT RGGGGGKIFG FSMTHEESMD 60 SDPPVTVTRQ FFPVELDSTS EIMGPTRGSV PPPAPPSSSL SSFPRAHWVG VNFGQSDSGS 120 PGKPPAAVEA AHQPMKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA 180 HAAARAYDRA AIKFRGVEAD INFSIEDYEE DLKQMTNLTK EEFVHVLRRQ STGFPRGSSK 240 YRGVTLHKYV YLGLFDTEID AARAYDKAAI KCNGKEAVTN FDPSIYENEL NPSSESSGVN 300 PAEHNLDLSL GNSNSKKNNQ AFGSSDHGQN AAVEVQHSAS MQLEADWRNQ GFQQKLNLQR 360 DRSREESDAH RRDGYLETEA MQLLLRTNLH SPAPTEMHKY GQFSRRPNVG DTQMPHTFPP 420 HFNSPNNYHH VQFPSSSEGG RIGSDLSLSM SDHPHQQQWQ SGMPTSNIFA TAAASSGFPP 480 QIRPSAQNCW LQKSGFHSLT RR

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MWDLNDSPDQ RPRGDESEGC SSQKTSADGD EEKGKRLAKT RGGGGGKIFG FSMTHEESMD  60
SDPPVTVTRQ FFPVELDSTS EIMGPTRGSV PPPAPPSSSL SSFPRAHWVG VNFGQSDSGS  120
PGKPPAAVEA AHQPMKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA  180
HAAARAYDRA AIKFRGVEAD INFSIEDYEE DLKQMTNLTK EEFVHVLRRQ STGFPRGSSK  240
YRGVTLHKYV YLGLFDTEID AARAYDKAAI KCNGKEAVTN FDPSIYENEL NPSSESSGVN  300
PAEHNLDLSL GNSNSKKNNQ AFGSSDHGQN AAVEVQHSAS MQLEADWRNQ GFQQKLNLQR  360
DRSREESDAH RRDGYLETEA MQLLLRTNLH SPAPTEMHKY GQFSRRPNVG DTQMPHTFPP  420
HFNSPNNYHH VQFPSSSEGG RIGSDLSLSM SDHPHQQQWQ SGMPTSNIFA TAAASSGFPP  480
QIRPSAQNCW LQKSGFHSLT RR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	2e-96	AP2 family protein