PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g782420.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 315aa MW: 34486.8 Da PI: 9.3988 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.5 | 2.9e-41 | 41 | 117 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dlse+++yhrrhkvCe hsk+++v+++g+eqrfCqqCsrfh+l+efDe+krsCrrrL++hn+rrrk+q Pd.00g782420.m01 41 CLVDGCNSDLSECRDYHRRHKVCELHSKTSKVTIKGQEQRFCQQCSRFHSLEEFDEGKRSCRRRLDGHNKRRRKPQL 117 **************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MENGSKGKLK DPGVSMMKSS SSAASLKRPR RTNNGAQIAS CLVDGCNSDL SECRDYHRRH 60 KVCELHSKTS KVTIKGQEQR FCQQCSRFHS LEEFDEGKRS CRRRLDGHNK RRRKPQLEPM 120 SINLGRFLSS YQGTRFLQFG SPQVCPTNAV MNSAWGGAMK AENDVLLHSH SQLSETRRNL 180 FPGSLSCQQS IESMLSQATA CQQLVGTNFA LGNSGNSHKM FANGLYCDVE SNRALSLLSS 240 TPASRGEIGL SHAGQSSSIW PAQPLIPRLR YNVLGMEDNA AISNLVADGS SNANNMPLQG 300 MFQIIYDGST AGAPH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 115 | KRSCRRRLDGHNKRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 8e-53 | SBP family protein |