PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g782370.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1092aa MW: 121609 Da PI: 6.2733

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g782370.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.6	6.6e-55	124	238	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e ++rwlk+ e++ iL+n+ek++l+ e++++p+sgsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+np+f Pd.00g782370.m02 124 QEaQTRWLKPAEVLYILQNHEKFKLAPEPPQQPSSGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKVGNAETLNCYYAHGEDNPNF 216 5669*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhyle 116 qrr+yw+L+ ++e+ivlvhy+e Pd.00g782370.m02 217 QRRSYWMLDPAYEHIVLVHYRE 238 ******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1092 aa Download sequence
MTKTTLPSTV GRNLVPTYPS IPLLRGICRG CSGLSIILGK YTISGLDIGT HDSRPPKLLQ 60 APSSKLQPYT PRTTGSPVIR FSVVLVDANE HKSNAFSAVR GQVLIFRQSL NMMQSGYNIN 120 DLFQEAQTRW LKPAEVLYIL QNHEKFKLAP EPPQQPSSGS LFLFNKRVLR FFRRDGHHWR 180 KKKDGRTVGE AHERLKVGNA ETLNCYYAHG EDNPNFQRRS YWMLDPAYEH IVLVHYREIS 240 EGKSSTGTFA QSPVSSSSFS PSPSDKTTQN RGSTSMISDL REPYQNLSSP GSIEVNSDVA 300 IKKNGRENPD KLYGTGESDS SAKFDVSQAL RQLEEQLSLN EDSFNEFVDD NPNSDIMDRF 360 NEFLDDTNGS DILEDHSDMT NQDQFTAFHG PEYVVHDQFY GGRAQMQGNA NNSDEHSQFI 420 GQEFADRNKE SVPWKEVLDS CKPSSVVEPK EKCLYELDTN EKLPSSFRSG PTDGQEHFSL 480 SLPEEVDSFK LSPCSSAMGT HSDYYTSLFE QGQTGTLDSD ISLTVAQKQK FTIREISPEW 540 GYATEATKVI IVGSFLCDPS ESAWSCMFGD VEVPAQIIQD GVLRCKAPPH LFGKVTICIT 600 SSNRVSCSEV REFEYRVKSS SGTNNSPPTE TTKSAEELLL LVRFVQMLMS DSSMQNRDSV 660 EPETLRRLKA DDDSWDSIIE ALLLGNGSAS SNIYWLLEEL LKDKLQQWLS SRSHGLDQTG 720 CSLSKKEQGI IHMVAGLGFE WALNSILSCG VNINFRDING WTALHWAARF GREKMVAVLI 780 ASGASAGAVT DPNSQDPIGK TPASIAAISG NKGLAGYLSE VSLTSHLSSL TLEESELSKG 840 SAEVEAEITV NSISNRSLQG NEDQASLKNT LAAVRNSAQA AARIQSAFRA HSFRKRQQKE 900 AGVSIDDYGI SSDDIQGLSA MSKLAFRNPR DYNSAAVSIQ KKYRGWKGRK DFLALRQKVV 960 KIQAHVRGYQ LRKHYKVICW AVGILDKVVL RWRRKGVGLR GFRHETQSSE ESEDEDILKV 1020 FRKQKVDGAI EEAVSRVLSM VESPEARQQY HRMLGRYHQA KAELGGTSGE ADVPNSLDDT 1080 FNIEDIDMYQ FP

Sequence ? help Back to Top

Protein Sequence Length: 1092 aa Download sequence

MTKTTLPSTV GRNLVPTYPS IPLLRGICRG CSGLSIILGK YTISGLDIGT HDSRPPKLLQ  60
APSSKLQPYT PRTTGSPVIR FSVVLVDANE HKSNAFSAVR GQVLIFRQSL NMMQSGYNIN  120
DLFQEAQTRW LKPAEVLYIL QNHEKFKLAP EPPQQPSSGS LFLFNKRVLR FFRRDGHHWR  180
KKKDGRTVGE AHERLKVGNA ETLNCYYAHG EDNPNFQRRS YWMLDPAYEH IVLVHYREIS  240
EGKSSTGTFA QSPVSSSSFS PSPSDKTTQN RGSTSMISDL REPYQNLSSP GSIEVNSDVA  300
IKKNGRENPD KLYGTGESDS SAKFDVSQAL RQLEEQLSLN EDSFNEFVDD NPNSDIMDRF  360
NEFLDDTNGS DILEDHSDMT NQDQFTAFHG PEYVVHDQFY GGRAQMQGNA NNSDEHSQFI  420
GQEFADRNKE SVPWKEVLDS CKPSSVVEPK EKCLYELDTN EKLPSSFRSG PTDGQEHFSL  480
SLPEEVDSFK LSPCSSAMGT HSDYYTSLFE QGQTGTLDSD ISLTVAQKQK FTIREISPEW  540
GYATEATKVI IVGSFLCDPS ESAWSCMFGD VEVPAQIIQD GVLRCKAPPH LFGKVTICIT  600
SSNRVSCSEV REFEYRVKSS SGTNNSPPTE TTKSAEELLL LVRFVQMLMS DSSMQNRDSV  660
EPETLRRLKA DDDSWDSIIE ALLLGNGSAS SNIYWLLEEL LKDKLQQWLS SRSHGLDQTG  720
CSLSKKEQGI IHMVAGLGFE WALNSILSCG VNINFRDING WTALHWAARF GREKMVAVLI  780
ASGASAGAVT DPNSQDPIGK TPASIAAISG NKGLAGYLSE VSLTSHLSSL TLEESELSKG  840
SAEVEAEITV NSISNRSLQG NEDQASLKNT LAAVRNSAQA AARIQSAFRA HSFRKRQQKE  900
AGVSIDDYGI SSDDIQGLSA MSKLAFRNPR DYNSAAVSIQ KKYRGWKGRK DFLALRQKVV  960
KIQAHVRGYQ LRKHYKVICW AVGILDKVVL RWRRKGVGLR GFRHETQSSE ESEDEDILKV  1020
FRKQKVDGAI EEAVSRVLSM VESPEARQQY HRMLGRYHQA KAELGGTSGE ADVPNSLDDT  1080
FNIEDIDMYQ FP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein