PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g780520.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 244aa MW: 28012.8 Da PI: 8.9171 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.8 | 2.1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva+iifs++gklye++s Pd.00g780520.m01 9 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 95.7 | 7.2e-32 | 82 | 172 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +++ es+++e+ kLk + e+Lqr+qR+llGedL++L+ keL+qLe+qLe+slk++R +K++++l+q+++lq+ke++l e+n++L+ kl+ Pd.00g780520.m01 82 KPAKELESSYREYLKLKGRFESLQRTQRNLLGEDLGPLNTKELEQLERQLESSLKQVRCTKTQFMLDQLSDLQNKEQMLIEANRDLSLKLD 172 4677899*******************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSILCD AEVALIIFSN RGKLYEFCSS 60 SSILKTLERY QKCSYGQVEV NKPAKELESS YREYLKLKGR FESLQRTQRN LLGEDLGPLN 120 TKELEQLERQ LESSLKQVRC TKTQFMLDQL SDLQNKEQML IEANRDLSLK LDDISSRNQI 180 RQSWEGGNQG GMAYETQHAQ SQGFFQPLDC NPTLQIGYSN VGSEQMSATT HAQQVNGFIP 240 GWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 1e-124 | MIKC_MADS family protein |