PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g779610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 607aa MW: 69208.9 Da PI: 6.8551

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g779610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	95.6	5.7e-30	155	249	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+r+e++ k + k+rr ra tr gCka ++v++++ g+w+v+kle++HnHe Pd.00g779610.m01 155 NFYNAYAKQTGFSIRVNSYYRSKKDNSIISREFCCSKEGFRRERHAKkdsgeDAKRRRARALTREGCKALMTVRRRDCGRWYVAKLEKNHNHE 247 6****************************************999989999899999********************************* PP FAR1 89 la 90 l+ Pd.00g779610.m01 248 LV 249 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MYQPSDLEIQ AHNLTNPTAR IVLIFGKRKQ SVILVLPFPS GPRRRAFSSL ENSHAFFSLS 60 HSLQHQNLKL VVRETTELKG THLFEFECEA KGVDSFVALG DEGYEHSVAE EVEAPVVLDD 120 GKEGYVDFDL SQYIGGGVVE PTLGMEFTSE DDARNFYNAY AKQTGFSIRV NSYYRSKKDN 180 SIISREFCCS KEGFRRERHA KKDSGEDAKR RRARALTREG CKALMTVRRR DCGRWYVAKL 240 EKNHNHELVT PAMRHFLRSH KQDFAPEKSC SNSFSSPGLS LDAPVDVLTD CSSFGKMEFA 300 VQSNVNYIGR GRLSTFGIDA QSLIITDYDP AISRAVQQVF PQSSHRYCKW HIISKMPKEL 360 GHVYSVTPRT FQVEFDRCIN KSETPDAFES TWQMLLDKYN LRGNNWLQSL YIDRKLWVPV 420 YMRDTFFAGM YAAQRSGSVN SLFDGYVNSG TTLQDFADQY EKALDERYEK EAKAEFETFY 480 TKPVLKTPLP VEKQGADIYT RNMFTIFQDE VFESLLFAVK LSAEDGGTST YEANSQKGRN 540 LQYNILYQEA IKCAEEGMAS DHIFKNSHQA ELLMLYCKCP GHDSNCLKDS GSPWKMGDDI 600 PSSLRVF

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MYQPSDLEIQ AHNLTNPTAR IVLIFGKRKQ SVILVLPFPS GPRRRAFSSL ENSHAFFSLS  60
HSLQHQNLKL VVRETTELKG THLFEFECEA KGVDSFVALG DEGYEHSVAE EVEAPVVLDD  120
GKEGYVDFDL SQYIGGGVVE PTLGMEFTSE DDARNFYNAY AKQTGFSIRV NSYYRSKKDN  180
SIISREFCCS KEGFRRERHA KKDSGEDAKR RRARALTREG CKALMTVRRR DCGRWYVAKL  240
EKNHNHELVT PAMRHFLRSH KQDFAPEKSC SNSFSSPGLS LDAPVDVLTD CSSFGKMEFA  300
VQSNVNYIGR GRLSTFGIDA QSLIITDYDP AISRAVQQVF PQSSHRYCKW HIISKMPKEL  360
GHVYSVTPRT FQVEFDRCIN KSETPDAFES TWQMLLDKYN LRGNNWLQSL YIDRKLWVPV  420
YMRDTFFAGM YAAQRSGSVN SLFDGYVNSG TTLQDFADQY EKALDERYEK EAKAEFETFY  480
TKPVLKTPLP VEKQGADIYT RNMFTIFQDE VFESLLFAVK LSAEDGGTST YEANSQKGRN  540
LQYNILYQEA IKCAEEGMAS DHIFKNSHQA ELLMLYCKCP GHDSNCLKDS GSPWKMGDDI  600
PSSLRVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-66	FAR1 family protein