PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g778590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 1043aa MW: 117803 Da PI: 5.4652

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g778590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	54.4	4.2e-17	14	61	1	49
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 + pGfrFhPtdeelv +yL++k++++ l++ e ik+vdiyk++PwdLpk Pd.00g778590.m01 14 MLPGFRFHPTDEELVGFYLRRKIQQRLLPI-ELIKQVDIYKYDPWDLPK 61 579*************************.89************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 1043 aa Download sequence
MDEKNDMDKI DDVMLPGFRF HPTDEELVGF YLRRKIQQRL LPIELIKQVD IYKYDPWDLP 60 KSAPPPKKLL DKSLPANDAW AICRIFKKTN SMAQRALSHS WGSPFQEPTA ASDLLNQGAH 120 CTQFSSENMS CTTDIGSSIQ FWSNNDLQQA SNASYSAFDT LPYKPINPTG SKPSIFDADQ 180 FPNGFMISPG EMSGPISPAL IGDLSNTTGS IDFDGSQQQQ FSGFSINLSQ NQMQGNMETG 240 ENEGGFRKNL SSSTSSYDRS ISPSFPFCPA FDGPNRPFST SLRDLVRLRL PPQSPKFMGS 300 DTLDAKPFST AVGDGDEDVN DNSAYSSTMV ESECDFDADA GKNVEFELED SARNLSNCED 360 RDGDDEGLIC DSMMVESENG DDNVSSVKPL SFVHVASREP AELYRELRNA EKGAKRRRSD 420 WDSLQEIFRY FGNSGWASDQ SLAIYIGRSF FPTAVHNFRN FFFKKCSADV ARYVVSLGPS 480 DDAVEFLFPV FVEYCLEEFP DEIKRFRGMI ESADLTKPHT WFPFARAMKR KIVYHCGPTN 540 SGKTYNALQS FMEAKKGIYC SPLRLLAMEV FDKVNGNGVY CSLHTGQEKK FVPFSNHVAC 600 TVEMVSTDEL YDVAVIDEIQ MMADPYRGFA WSRALLGLKA DEIHLCGDPS VLDIVRKICS 660 ETGDELYVHH YERFKPLVVE AKTLLGDLKN VRSGDCVVAF SRREVFEVKI AIEKHTNHRC 720 CVIYGALPPE TRRQQANLFN DQNNEYDVLV ATDAVGMGLN LNIRRVVFYG LAKYNGDKTV 780 AVPASQVKQI AGRAGRRGSI YPDGLTTTLN LDDLAYLIEC LKQPFDEVKK VGLFPFFEQV 840 ELFAGKMPNV TFCQLLEKFS ENCRLDGSYF LCRHDHIKKV ANMLQKVPEL SLEDRFNFCF 900 APVNIRDPKA MYHLLRFASS YSQNLPVNIA MGIPKGSARN NKELLDLETK HQVLSMYMWL 960 SHHFEEETFP YWKKAEAMAT DIAELLGMSL ANANWKPESR AAENQKFQQK RDSYDRPRSL 1020 IKVYEKKRQD RSVQHELSEK VAA

Sequence ? help Back to Top

Protein Sequence Length: 1043 aa Download sequence

MDEKNDMDKI DDVMLPGFRF HPTDEELVGF YLRRKIQQRL LPIELIKQVD IYKYDPWDLP  60
KSAPPPKKLL DKSLPANDAW AICRIFKKTN SMAQRALSHS WGSPFQEPTA ASDLLNQGAH  120
CTQFSSENMS CTTDIGSSIQ FWSNNDLQQA SNASYSAFDT LPYKPINPTG SKPSIFDADQ  180
FPNGFMISPG EMSGPISPAL IGDLSNTTGS IDFDGSQQQQ FSGFSINLSQ NQMQGNMETG  240
ENEGGFRKNL SSSTSSYDRS ISPSFPFCPA FDGPNRPFST SLRDLVRLRL PPQSPKFMGS  300
DTLDAKPFST AVGDGDEDVN DNSAYSSTMV ESECDFDADA GKNVEFELED SARNLSNCED  360
RDGDDEGLIC DSMMVESENG DDNVSSVKPL SFVHVASREP AELYRELRNA EKGAKRRRSD  420
WDSLQEIFRY FGNSGWASDQ SLAIYIGRSF FPTAVHNFRN FFFKKCSADV ARYVVSLGPS  480
DDAVEFLFPV FVEYCLEEFP DEIKRFRGMI ESADLTKPHT WFPFARAMKR KIVYHCGPTN  540
SGKTYNALQS FMEAKKGIYC SPLRLLAMEV FDKVNGNGVY CSLHTGQEKK FVPFSNHVAC  600
TVEMVSTDEL YDVAVIDEIQ MMADPYRGFA WSRALLGLKA DEIHLCGDPS VLDIVRKICS  660
ETGDELYVHH YERFKPLVVE AKTLLGDLKN VRSGDCVVAF SRREVFEVKI AIEKHTNHRC  720
CVIYGALPPE TRRQQANLFN DQNNEYDVLV ATDAVGMGLN LNIRRVVFYG LAKYNGDKTV  780
AVPASQVKQI AGRAGRRGSI YPDGLTTTLN LDDLAYLIEC LKQPFDEVKK VGLFPFFEQV  840
ELFAGKMPNV TFCQLLEKFS ENCRLDGSYF LCRHDHIKKV ANMLQKVPEL SLEDRFNFCF  900
APVNIRDPKA MYHLLRFASS YSQNLPVNIA MGIPKGSARN NKELLDLETK HQVLSMYMWL  960
SHHFEEETFP YWKKAEAMAT DIAELLGMSL ANANWKPESR AAENQKFQQK RDSYDRPRSL  1020
IKVYEKKRQD RSVQHELSEK VAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	8e-22	NAC family protein