PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g778040.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 661aa MW: 73276 Da PI: 6.2679

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g778040.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.9	2.3e-13	311	351	8	48
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 Ed +l+ +v ++G g+W++++++ g++R++k+c++rw +yl Pd.00g778040.m01 311 EDAKLLAYVSKHGVGNWTLVPKKAGLNRCGKSCRLRWTNYL 351 9**************************************97 PP
2	Myb_DNA-binding	45	2.5e-14	359	400	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+ E+e ++++++ G++ W+ Ia+ ++ gRt++++k++w++ Pd.00g778040.m01 359 SFTPHEEEHIINLHEAIGSR-WSHIAKLLP-GRTDNDVKNYWNT 400 79****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MDSRFLLTLS LCFLCIFPHL SYSRSRVPLL IEEKKTEGSV LRLRRGASSA TFDPTRVTQL 60 SWHPRAFLYK GFLSEEECDH LIEIAKDKLE KSMVADNESG KSIESEVRTS SGMFLQKSQD 120 EVVANIEARI AAWTFLPIEN GESIQILHYE HGQKYEPHFD YFHDKANQEL GGHRVATVLM 180 YLSNIEKGGE TVFPNTQAQM SQSKDEDASD CAKQGYSVKP YKGDALLFFS LHPDATTDPS 240 SLHGSCPVIE GEKWSATKWI HVRSFEKSLK HAVSGDCADV NDNCPLWAKA GECEKNPTYM 300 VGSKGLPGFS EDAKLLAYVS KHGVGNWTLV PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF 360 TPHEEEHIIN LHEAIGSRWS HIAKLLPGRT DNDVKNYWNT KLKKKLSKMG IDPVTHKPFS 420 QILSDYGNIS SLPSIDNQFG FFFKNSNNTF VPKSEPSSGI TGLPLGVNTY SNMMMNPIGS 480 DNSTASTLSL GIVAQFQEIN QDCVQVQPHF LNEVASSCSS SSSPHATDHQ LSSQPTYLCQ 540 QSLHEAQITP SSSFNWSEFL LHDPFSSADK LKQEQDFHGT MMSSSSVIPT LAGGSEHNLN 600 ATTQASDFGS SAIHIGGQRN NNLAHDQASS SSMTSFVDTI LGQDSEMQAA FPELLDASFD 660 Y

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MDSRFLLTLS LCFLCIFPHL SYSRSRVPLL IEEKKTEGSV LRLRRGASSA TFDPTRVTQL  60
SWHPRAFLYK GFLSEEECDH LIEIAKDKLE KSMVADNESG KSIESEVRTS SGMFLQKSQD  120
EVVANIEARI AAWTFLPIEN GESIQILHYE HGQKYEPHFD YFHDKANQEL GGHRVATVLM  180
YLSNIEKGGE TVFPNTQAQM SQSKDEDASD CAKQGYSVKP YKGDALLFFS LHPDATTDPS  240
SLHGSCPVIE GEKWSATKWI HVRSFEKSLK HAVSGDCADV NDNCPLWAKA GECEKNPTYM  300
VGSKGLPGFS EDAKLLAYVS KHGVGNWTLV PKKAGLNRCG KSCRLRWTNY LRPDLKHDSF  360
TPHEEEHIIN LHEAIGSRWS HIAKLLPGRT DNDVKNYWNT KLKKKLSKMG IDPVTHKPFS  420
QILSDYGNIS SLPSIDNQFG FFFKNSNNTF VPKSEPSSGI TGLPLGVNTY SNMMMNPIGS  480
DNSTASTLSL GIVAQFQEIN QDCVQVQPHF LNEVASSCSS SSSPHATDHQ LSSQPTYLCQ  540
QSLHEAQITP SSSFNWSEFL LHDPFSSADK LKQEQDFHGT MMSSSSVIPT LAGGSEHNLN  600
ATTQASDFGS SAIHIGGQRN NNLAHDQASS SSMTSFVDTI LGQDSEMQAA FPELLDASFD  660
Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	9e-68	MYB family protein