PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g773960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TALE | ||||||||
Protein Properties | Length: 445aa MW: 49659.9 Da PI: 6.2975 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.3 | 1.1e-07 | 383 | 416 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Pd.00g773960.m01 383 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 416 469*****************************87 PP | |||||||
2 | ELK | 28.7 | 2.9e-10 | 337 | 358 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Pd.00g773960.m01 337 ELKHELKQGYKEKIVDIREEIL 358 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 445 aa Download sequence |
MAYHNHLSQQ DLPLHHFTDQ TQQQHQPFQS DQPDPNSKPT EPHHPFQAAP NWLNTALLRN 60 FTNADANNNH NNSPNNNGGG GASNFLNLHV TASDSTTSQA SNQWLSQPHR PILHRNHSDV 120 IDDVTAVAGD SMIAATISHD SADLKPDSSL NKTDIVVESG GGDGGMINWQ NARHKAEILS 180 HPLYEPLLSA HVACLRIATP VDQLPRIDAQ LAQSQNVVAK YSALGHGMVG DDKELDQFMR 240 HYVLLLCSFK EQLQQHVRVH AMEAVMACWE IEQSLQSLTG VSPGEGTGAT MSDDEDDQVD 300 SDANLFDGSM DGHDSMGFGP LIPTESERSL MERVRQELKH ELKQGYKEKI VDIREEILRK 360 RRAGKLPGDT TSVLKAWWQS HSKWPYPTEE DKARLVQETG LQLKQINNWF INQRKRNWHS 420 NPSTSTVLKS KRKSNAGENS GDRFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.1 | 0.0 | TALE family protein |