PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g772440.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 513aa    MW: 56044.1 Da    PI: 5.299
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g772440.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS344.91.3e-1051265041374
              GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsev 87 
                       l++lL+++Aea++  +++  la+ +L rl+el+sp++ ++m+RlaayfteAL+  l + +    k l  + t++++    ++++aa++l++++
  Pd.00g772440.m01 126 LIHLLMAAAEALTGANKSrdLARVILVRLKELVSPTDgTNMERLAAYFTEALQGLLEGAGGVQGKHLIGNGTHRDHghhPTDVIAAFQLLQDM 218
                       689*********997776669***********9987769******************966655566644444444445699************ PP

              GRAS  88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpf 176
                       sP++kf+h+taNqaIleav +++rvH++D+di++G+QW++L+qaL sR++gpp  +lRiT++++  sg  s  +++etg+rL++fA+++g pf
  Pd.00g772440.m01 219 SPYVKFGHFTANQAILEAVVHDRRVHVVDYDIMEGIQWASLMQALVSRKDGPPtpHLRITALSRGGSGrrSIGTVQETGRRLTSFAASIGQPF 311
                       *************************************************776556*********888898999******************** PP

              GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalf 268
                       +f+    ++ e++++++L++ +gEal++n++l+l ++  +s ++     ++L+  k+l+P++v++ve+e+   +++ F++rf+++l++ysa++
  Pd.00g772440.m01 312 SFHQCRLDSDETFRPSALKLVKGEALVINCMLNLPHFSYRSPDSIA---SFLSGAKTLNPRLVTLVEEEVRPaGDGGFVARFTDSLYHYSAVY 401
                       ****9999*****************************966665555...9********************999******************** PP

              GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvl 360
                       dslea++p +s++r+ vEr++lg++i   +a   ++   + e   +W+e+l+++GFkp+p+s  + +qaklll  ++ dgyrvee  ++ lvl
  Pd.00g772440.m01 402 DSLEAGFPMQSRARALVERVFLGPRIAGSLARIYRA---NGEVGCSWSEWLGAVGFKPMPISFANHCQAKLLLGLFN-DGYRVEEVsNHKLVL 490
                       **********************************99...889999********************************.******75388899* PP

              GRAS 361 gWkdrpLvsvSaWr 374
                       gWk+r L+s+S W+
  Pd.00g772440.m01 491 GWKSRCLLSASIWT 504
                       *************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MTQLLLSSAM AMAIDQTLGG HAFDLDLSGC STTTTNTMSS DHWYDWSPVV DWDALAPTDQ  60
LAGDDFHELI ESMMEDQDGT ELNSSSAQDE VHELEASNDT TSSGEIMMRT EEDGGANGED  120
SKGLRLIHLL MAAAEALTGA NKSRDLARVI LVRLKELVSP TDGTNMERLA AYFTEALQGL  180
LEGAGGVQGK HLIGNGTHRD HGHHPTDVIA AFQLLQDMSP YVKFGHFTAN QAILEAVVHD  240
RRVHVVDYDI MEGIQWASLM QALVSRKDGP PTPHLRITAL SRGGSGRRSI GTVQETGRRL  300
TSFAASIGQP FSFHQCRLDS DETFRPSALK LVKGEALVIN CMLNLPHFSY RSPDSIASFL  360
SGAKTLNPRL VTLVEEEVRP AGDGGFVARF TDSLYHYSAV YDSLEAGFPM QSRARALVER  420
VFLGPRIAGS LARIYRANGE VGCSWSEWLG AVGFKPMPIS FANHCQAKLL LGLFNDGYRV  480
EEVSNHKLVL GWKSRCLLSA SIWTSPSESD FVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-159GRAS family protein