PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g766460.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 855aa MW: 98286.7 Da PI: 8.1963

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g766460.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59	1.1e-18	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+++G g+W+++ar g++R +k+c++rw +yl Pd.00g766460.m01 23 KGPWTAEEDRLLIEYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 70 79********************************************97 PP
2	Myb_DNA-binding	48.1	2.7e-15	76	120	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+tIar ++ gRt++++k++w+++ Pd.00g766460.m01 76 RGQITPNEESIILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 120 6888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 855 aa Download sequence
MYLGVMAGHQ MGWGIIEEEG WRKGPWTAEE DRLLIEYVRL HGEGRWNSVA RLAGLKRNGK 60 SCRLRWVNYL RPDLKRGQIT PNEESIILEL HARWGNRWST IARSLPGRTD NEIKNYWRTH 120 FKKKAKVPSD ASEKAKTQVK RIMALLDENE NNKISSWPQV KQDMETSSAA YPHHTADHQE 180 QGFFYSMLNG NVYVPEASSS EDSFLWDGLW NLDDVHGNFG TAAGKASFHN LVISKLSPNL 240 TAQSLASQSQ DLSYYAFGSL TMALRFTTDA HANPNPNPNF TLLGQDPKSD PNFTFIVKVL 300 TFNRLESVAR CLRSLAAADY LTDKVQLHVY IDHFALGDAS SNVGQKLQES HRILEFVDGF 360 EWKYGDKLIH YRTANAGLQA QWLEAWWPSS DNEFAFVVED DLEVSPLYYK FLRSLIVNYY 420 YNASNYRPYI YGASLQRPRF VPGKHGNKIQ LDDRTRLFLY QLVGTWGQLL FPKPWKEFRL 480 WYDNHKAKGI KPFLDGMVTT GWYKKIGEKI WTPWFIKFIH TRGYFNIYTN FLHERALSVS 540 HRDAGVNYGK TAGPDSHILD ESSLDFGFWD MQPLSDLRWY DFCFREIFPE RVVGSLDELG 600 SVLNSVQKQD TVIIVSLFGV PEMVIRNLLC HFDSLNLWHY VFIGPESDFL FDLARRGHPV 660 IGTDQFLRSV GAYKLMSFQD SNVEMIKEVL VKAYVLKKCL ESRYNIWVVD GKILPVNSDL 720 FIESDPSYDF YIGKSSELFF ARRSSSARSI GGNDFISKFA MMVNSLLAKR HSLSFGYIMA 780 NFLEQKGVRV KNLDETSLCL RIGNSNVNQS LGDGKQMVFW SSDMASDLLR KRLQELGIWI 840 VNDDFSCKAV VCHKS

Sequence ? help Back to Top

Protein Sequence Length: 855 aa Download sequence

MYLGVMAGHQ MGWGIIEEEG WRKGPWTAEE DRLLIEYVRL HGEGRWNSVA RLAGLKRNGK  60
SCRLRWVNYL RPDLKRGQIT PNEESIILEL HARWGNRWST IARSLPGRTD NEIKNYWRTH  120
FKKKAKVPSD ASEKAKTQVK RIMALLDENE NNKISSWPQV KQDMETSSAA YPHHTADHQE  180
QGFFYSMLNG NVYVPEASSS EDSFLWDGLW NLDDVHGNFG TAAGKASFHN LVISKLSPNL  240
TAQSLASQSQ DLSYYAFGSL TMALRFTTDA HANPNPNPNF TLLGQDPKSD PNFTFIVKVL  300
TFNRLESVAR CLRSLAAADY LTDKVQLHVY IDHFALGDAS SNVGQKLQES HRILEFVDGF  360
EWKYGDKLIH YRTANAGLQA QWLEAWWPSS DNEFAFVVED DLEVSPLYYK FLRSLIVNYY  420
YNASNYRPYI YGASLQRPRF VPGKHGNKIQ LDDRTRLFLY QLVGTWGQLL FPKPWKEFRL  480
WYDNHKAKGI KPFLDGMVTT GWYKKIGEKI WTPWFIKFIH TRGYFNIYTN FLHERALSVS  540
HRDAGVNYGK TAGPDSHILD ESSLDFGFWD MQPLSDLRWY DFCFREIFPE RVVGSLDELG  600
SVLNSVQKQD TVIIVSLFGV PEMVIRNLLC HFDSLNLWHY VFIGPESDFL FDLARRGHPV  660
IGTDQFLRSV GAYKLMSFQD SNVEMIKEVL VKAYVLKKCL ESRYNIWVVD GKILPVNSDL  720
FIESDPSYDF YIGKSSELFF ARRSSSARSI GGNDFISKFA MMVNSLLAKR HSLSFGYIMA  780
NFLEQKGVRV KNLDETSLCL RIGNSNVNQS LGDGKQMVFW SSDMASDLLR KRLQELGIWI  840
VNDDFSCKAV VCHKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	7e-81	MYB family protein