PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g765600.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRAS | ||||||||
Protein Properties | Length: 408aa MW: 46361.9 Da PI: 7.3753 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 297.8 | 2.7e-91 | 23 | 404 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 l++ Ll A+av++++ + a + L++l + +s gd++qR++ayf+ +Laarl+ s ++ + ++ts +ee+ a++ ++ vsP+++f Pd.00g765600.m02 23 LIHMLLITATAVNENNVSSALENLSELYKSVSLCGDSVQRVVAYFADGLAARLLTRKSPFFDMIMKEPTS----EEEFVAFTSLYRVSPYYQF 111 6899***************************************************999999888777775....78889999*********** PP GRAS 94 shltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfef 178 +h+taNqaI ea+e+e +++H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ s +el+et++rL +f + + ++ fef Pd.00g765600.m02 112 AHFTANQAIIEAFEKEeeknnRALHVIDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGQ----SLDELRETENRLMSFSKGFrNLIFEF 200 **************9977777788**********************99755566*********....9****************97579**** PP GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271 + l l +l +Lr k++E++aVnlv++l +l +s+++++ Lk v l+P +v++veqe +++ +Fl rf+e+l+y++a+fdsl Pd.00g765600.m02 201 QGL----LRGSKLINLRKKRNETIAVNLVFHLNTLS-NSLKISD----SLKSVHILNPSIVILVEQEGSRSPRNFLSRFMESLHYFAAMFDSL 284 **8....66667789*****************9997.6666666....9******************************************** PP GRAS 272 eaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk......sdg......... 348 + lp es er ++E+ lg+ei++++ +++ + e++e+W++r+e+ GF+ ++ls+k qa+lll+ +dg Pd.00g765600.m02 285 DDCLPLESAERLSIEKNHLGKEIKSMLNYDNDDvNCSKIEKMETWKARMESHGFEGINLSSKSKIQARLLLKIRThycplqFDGessggstag 377 *****************************9999788999*******************************97433101011222222222223 PP GRAS 349 yrveee.sgslv.lgWkdrpLvsvSaW 373 ++v e+ +g + lgW+dr L++vSaW Pd.00g765600.m02 378 FKVFERnDGRTIsLGWQDRYLLTVSAW 404 5554444444446************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence |
MLKLDHKKKG GHVLDEDGKG LHLIHMLLIT ATAVNENNVS SALENLSELY KSVSLCGDSV 60 QRVVAYFADG LAARLLTRKS PFFDMIMKEP TSEEEFVAFT SLYRVSPYYQ FAHFTANQAI 120 IEAFEKEEEK NNRALHVIDF DVSYGFQWPS LIQSLSEKAT SGNRISLRIT GFGQSLDELR 180 ETENRLMSFS KGFRNLIFEF QGLLRGSKLI NLRKKRNETI AVNLVFHLNT LSNSLKISDS 240 LKSVHILNPS IVILVEQEGS RSPRNFLSRF MESLHYFAAM FDSLDDCLPL ESAERLSIEK 300 NHLGKEIKSM LNYDNDDVNC SKIEKMETWK ARMESHGFEG INLSSKSKIQ ARLLLKIRTH 360 YCPLQFDGES SGGSTAGFKV FERNDGRTIS LGWQDRYLLT VSAWNCVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03450.1 | 3e-53 | GRAS family protein |