PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g754100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YC
Protein Properties Length: 288aa    MW: 32276.1 Da    PI: 4.0803
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g754100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC35.32.4e-11741541897
             NF-YC  18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97 
                       + e+P +r+k+i+k d  ++++ +ea  l+  + +lf+  l+ rs   a e+kr+ +k   +  av+r   + dfl+d+ p
  Pd.00g754100.m01  74 RPEFPNTRVKRIMKLDSCINKVNSEALLLVPYSAQLFLEFLAERSAEVATEKKRKIVKLEHMRVAVKRHRpTSDFLLDELP 154
                       5689**************************************************************9975389*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MAEEQNAARE EDNIAGEENA EQEEENAEQE EDDAEQEEDN PENAVENAAV KEKAKVAQEE  60
ENAEPIRSEN SQIRPEFPNT RVKRIMKLDS CINKVNSEAL LLVPYSAQLF LEFLAERSAE  120
VATEKKRKIV KLEHMRVAVK RHRPTSDFLL DELPVPSQPS DHQPTDRSSS RTVSHAPAPA  180
RRDRSRSRAF SDKPAPAGTR RIDHFFLTKE IPIQTEQSLI ETEETPIETE EASIEIDEAP  240
IETDEGPIET DEASVETDEA SIEIDEAPIV TDQGPIETGE GPIETNES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.17e-43NF-YC family protein