PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g749740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 510aa MW: 59600.5 Da PI: 8.9048

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g749740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	50.4	7.2e-16	1	70	58	127
NAM 58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyr 127 +yfF++ ++k + ++ ++r++++gyW t k +++ + ++e +g+kk+L fy gr+++++ kt+W+m ey Pd.00g749740.m01 1 MYFFTRVERKFTDSTLPRRKARNGYWIPTSKYENIEQ-GTEIIGVKKSLRFYAGRHRNASaKTNWTMLEYI 70 5********************************99.999*******997766544*******6 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MYFFTRVERK FTDSTLPRRK ARNGYWIPTS KYENIEQGTE IIGVKKSLRF YAGRHRNASA 60 KTNWTMLEYI AGGTAAVSQS TYFLYDWVLC KVYEEELSAM KVPESNNQGN AANEEVTGEQ 120 LHPHIRTSPL EDLFGAKKRR RLSKNSGQLP LTICTSSYRR PCLPELPFEV IIEILSRLPV 180 ESVLRFKCVC RQWCSTFQEE DFIAKHWVRA SPLRLPYRYV WDYKNSDSFY DQNFKLIGNS 240 CGLFLEKNYS SQVFRIRNFA MHQVLYLPHA PNAYINTMCF VLNLSTGECK VAHFYIKGNL 300 DSEVGLKVLT VGIDCQWRPL KLSNETIWGQ HEKDLLKRHI LKPNQTEGAA HYVEIIRAGQ 360 DLYLEVQSFD FWTECFVTTR LPERVFGNLE KVFVFRWNHH LAVGEIVEEA LNILVLEDFK 420 DHKWSENKIV VPYKFLKDNP SLKNQIWAPV RVIYGKLELQ GLKSFLTYDM EREIITRIEV 480 GNDPDKEHFA SHKPSLLTFK GMRPKRVRCD

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MYFFTRVERK FTDSTLPRRK ARNGYWIPTS KYENIEQGTE IIGVKKSLRF YAGRHRNASA  60
KTNWTMLEYI AGGTAAVSQS TYFLYDWVLC KVYEEELSAM KVPESNNQGN AANEEVTGEQ  120
LHPHIRTSPL EDLFGAKKRR RLSKNSGQLP LTICTSSYRR PCLPELPFEV IIEILSRLPV  180
ESVLRFKCVC RQWCSTFQEE DFIAKHWVRA SPLRLPYRYV WDYKNSDSFY DQNFKLIGNS  240
CGLFLEKNYS SQVFRIRNFA MHQVLYLPHA PNAYINTMCF VLNLSTGECK VAHFYIKGNL  300
DSEVGLKVLT VGIDCQWRPL KLSNETIWGQ HEKDLLKRHI LKPNQTEGAA HYVEIIRAGQ  360
DLYLEVQSFD FWTECFVTTR LPERVFGNLE KVFVFRWNHH LAVGEIVEEA LNILVLEDFK  420
DHKWSENKIV VPYKFLKDNP SLKNQIWAPV RVIYGKLELQ GLKSFLTYDM EREIITRIEV  480
GNDPDKEHFA SHKPSLLTFK GMRPKRVRCD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	142	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52890.1	2e-14	NAC family protein