PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g749100.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 959aa MW: 105434 Da PI: 5.2165

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g749100.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.8	2.5e-29	599	650	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Pd.00g749100.m01 599 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 650 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 959 aa Download sequence
MEYPVTPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELMNF DTYAGWCSPA 60 AMDQISASFG VPSCPSVTYA PLDALNFADQ NGEALPGTEG GETFNVGGSS FSCEDKIAFQ 120 QMDTPQFGVS TDSHDANDLA AKLNNGSFQQ NNVMDVGKYM ISRPPRLSLN EKMLKALSLF 180 KESSGGGILA QLWVPVKYGD HYLLSTCEQP YLLDHILAGY REVSRTFTFP AEEKQGSILG 240 LPGRVFVSKV PEWTSNVSYY NKAEYLRVDH AVNHQVRGSI ALPVFNFDSE MSCCAVLELV 300 STKEKPNFDI EMEIVCNALQ AVNLRTMVPP RLLPQCLSMN QRAALTEITD VLRAVCHAHI 360 LPLALTWIPC CYSEGDGDEI RRVRVRGGIT NSNEKSILCI DETACYVNDR TMQGFVHACV 420 EHHLEVGEGI AGKALQSNHP FFLHDVKVYD IYEYPLVHHA RKYGLNAAVA IRLRSTYTGD 480 DDYILEFFLP VNVKGSSEQQ LLLNNLSGTM QKMCKSLRTV SDAELAGVQG SDTGFQKGPI 540 PNSPQQRNSQ TASSDSEFNS IENMPSDVFN RRNGGIEAEN PCEQAPGSRR QMEKKRSTAE 600 KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV 660 LDSVQGVEGG LKYDPTTGGF VATGSIIQDF DAQKSCLFPE KSLPVQNSEL VTQDTIPVPS 720 VSCNNGKSLA IKLEEDGCCI PTSHEEGVKK QNIPLMPQRD SKPIAIEGNK WGHSKNSLKL 780 ENSDCHFVSQ SSSSLAVADD MDTGVDGDDG IVEYNQHTSS SMTGSTNCSG STLRSSSSQS 840 FEEQKQPNMN ASSVENGSKI TVKATYKEDT IRFKFDPSVG CFQLYEEVAK RLKLQNGTFQ 900 LKYLDDEEEW VMLVSDADLR ECLEILDDIG TRSVKFMVRD TPFGVGSSGS SNCFLAGGL

Sequence ? help Back to Top

Protein Sequence Length: 959 aa Download sequence

MEYPVTPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELMNF DTYAGWCSPA  60
AMDQISASFG VPSCPSVTYA PLDALNFADQ NGEALPGTEG GETFNVGGSS FSCEDKIAFQ  120
QMDTPQFGVS TDSHDANDLA AKLNNGSFQQ NNVMDVGKYM ISRPPRLSLN EKMLKALSLF  180
KESSGGGILA QLWVPVKYGD HYLLSTCEQP YLLDHILAGY REVSRTFTFP AEEKQGSILG  240
LPGRVFVSKV PEWTSNVSYY NKAEYLRVDH AVNHQVRGSI ALPVFNFDSE MSCCAVLELV  300
STKEKPNFDI EMEIVCNALQ AVNLRTMVPP RLLPQCLSMN QRAALTEITD VLRAVCHAHI  360
LPLALTWIPC CYSEGDGDEI RRVRVRGGIT NSNEKSILCI DETACYVNDR TMQGFVHACV  420
EHHLEVGEGI AGKALQSNHP FFLHDVKVYD IYEYPLVHHA RKYGLNAAVA IRLRSTYTGD  480
DDYILEFFLP VNVKGSSEQQ LLLNNLSGTM QKMCKSLRTV SDAELAGVQG SDTGFQKGPI  540
PNSPQQRNSQ TASSDSEFNS IENMPSDVFN RRNGGIEAEN PCEQAPGSRR QMEKKRSTAE  600
KNVSLSVLQQ YFSGSLKDAA KSIGVCPTTL KRICRQHGIS RWPSRKINKV NRSLKKIQTV  660
LDSVQGVEGG LKYDPTTGGF VATGSIIQDF DAQKSCLFPE KSLPVQNSEL VTQDTIPVPS  720
VSCNNGKSLA IKLEEDGCCI PTSHEEGVKK QNIPLMPQRD SKPIAIEGNK WGHSKNSLKL  780
ENSDCHFVSQ SSSSLAVADD MDTGVDGDDG IVEYNQHTSS SMTGSTNCSG STLRSSSSQS  840
FEEQKQPNMN ASSVENGSKI TVKATYKEDT IRFKFDPSVG CFQLYEEVAK RLKLQNGTFQ  900
LKYLDDEEEW VMLVSDADLR ECLEILDDIG TRSVKFMVRD TPFGVGSSGS SNCFLAGGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein