PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g747550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 223aa    MW: 24237.1 Da    PI: 8.4975
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g747550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS138.19.2e-43451932149
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilk 92 
                       ++lLl+cA a++s+d +laq++++ l++ as+ gdp+qRl++ +++AL +r ++ +++ ++ ++ s++s++  ++ +++++l  ++++ P+++
  Pd.00g747550.m01  45 EKLLLHCASALESNDVTLAQQVMWVLNNVASSVGDPNQRLTSWILRALISRASKVCPTPMN-FNGSTSSSTIPTRLMSVTELagYVDLIPWHR 136
                       689***************************************************8777775.5555555445666666666689********* PP

              GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgs 149
                       f++ + N+aI +a++g+ +vHi+Df+i++++QWp+L++aLa+Rpegpp lR+T+ + 
  Pd.00g747550.m01 137 FGYCASNSAIFKAIQGCPKVHILDFSITHCMQWPTLIDALAKRPEGPPLLRVTVPNW 193
                       *****************************************************8655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MKTEVRGSTT SISLQNPTTI FNTSQGASLT ALTGCLGSLD GACIEKLLLH CASALESNDV  60
TLAQQVMWVL NNVASSVGDP NQRLTSWILR ALISRASKVC PTPMNFNGST SSSTIPTRLM  120
SVTELAGYVD LIPWHRFGYC ASNSAIFKAI QGCPKVHILD FSITHCMQWP TLIDALAKRP  180
EGPPLLRVTV PNWRPQVPPL LNVSSEEVGL RLXXXXSIYI KPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.15e-56GRAS family protein