PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g747440.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 306aa    MW: 33845.7 Da    PI: 10.2238
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g747440.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731032.5e-3274164497
            DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                        rlwse+Dei++L+G+i+++ k+g    + + af+ef+kk+++++vsk ql++KirrLK K++kk ++   g++p+fsk+h+ k+f+lskk+W
  Pd.00g747440.m01  74 GRLWSEDDEIAILKGMIEYQVKNGPVTNSTVGAFHEFIKKKLQVDVSKLQLSDKIRRLKMKYQKKGEN---GEDPVFSKPHEVKSFDLSKKVW 163
                       59**********************99999**********************************99999...********************** PP

            DUF573  97 g 97 
                       g
  Pd.00g747440.m01 164 G 164
                       8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MNDTVKPNKK NAPAKPAPAS NSLSKRPETE PNKKNAPSSS NSGSKRRAET EPNPKDSKKK  60
KVVNSGDDDD GKKGRLWSED DEIAILKGMI EYQVKNGPVT NSTVGAFHEF IKKKLQVDVS  120
KLQLSDKIRR LKMKYQKKGE NGEDPVFSKP HEVKSFDLSK KVWGIEANGV DDNAKDSKRK  180
PRKSNKVDKA TVLALPVSDV APVSDVAEKK EELNVANGGI KADPVDFWSK YPCLSGSLGL  240
ENSTPRSDLT TLMIQKMPLI GKSKAKELEG KWRALQLIEM ELSVKKLALM QEQAKFVLDS  300
MKSSED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14561KRRAETEPNPKDSKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.14e-26GeBP family protein