PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g746560.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MIKC_MADS

Protein Properties

Length: 219aa MW: 24974.5 Da PI: 9.5528

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g746560.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	94.4	5.1e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss Pd.00g746560.m01 9 KRIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSTRGKLYEFSS 59 79***********************************************96 PP
2	K-box	72.2	1.6e-24	84	171	11	98
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++e+ + + + + ++i+ ++ ++ +llG++Les+s++eLqq e+qLe+sl+kiR++K++ll+eqie+l++ ek+l e+n +Lr+k Pd.00g746560.m01 84 QVDMEHGKDDTSSMARKIDFIEASKQKLLGNCLESCSIEELQQTENQLERSLSKIRARKTQLLREQIEKLKEEEKNLFEQNAKLREKC 171 556788899999*************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MVRGKTQMKR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFST RGKLYEFSSS 60 SISNTLDRYQ KRVKDQGLGS KAVQVDMEHG KDDTSSMARK IDFIEASKQK LLGNCLESCS 120 IEELQQTENQ LERSLSKIRA RKTQLLREQI EKLKEEEKNL FEQNAKLREK CGMQPLCPPS 180 TRKDGENCAV RQPRTPDLED VETDLVIGPP ERRRSGQNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22950.1	4e-68	MIKC_MADS family protein