PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g745970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 983aa MW: 109367 Da PI: 9.0419

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g745970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.2	2.1e-06	70	126	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +eL++ g+t +qV+ +F +R + +k Pd.00g745970.m01 70 KRPRDLLNPKAIKYMQSVFSIKDAISKKESRELSALFGVTGTQVRDFFNSQRSRVRK 126 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 983 aa Download sequence
MEDLSEMEIG SSVESFQKFL DSQRQLFHSQ IDQLQKVVVT QCNLTGVNPL SQEMAAGALS 60 VKIDGPFAGK RPRDLLNPKA IKYMQSVFSI KDAISKKESR ELSALFGVTG TQVRDFFNSQ 120 RSRVRKLVQL SREKATRSSE HKELLDGVST SSDPLTPIDL VPLNSVGPNS VEDAPSCSTQ 180 DDALSGLDDL DKHFVDNIFN LMRKEETFSG QVKLMEWILQ IQNSSVLCWF LNTGGVMILA 240 TWLSQAAIEE QTSVLLVILK VLCHLPLHKA LPVHMSAILQ SVNRLRFYRT ADVSNRARVL 300 LSRWSKLLAR IQNMKKPNGM KTSSDSQHEL VMLKQSIDEV MGDESWKSNI DIPEDIFATP 360 FENAENSRRS EASEPLKLLT ASSDESNKKQ ILGVSSSQFR ARRKVQLVEQ PGQKSAGRSV 420 QVTRATPVSK GRPMSADDIQ KAKMRAQFMQ SKYGKSGSSN ENKELKTEGG NKLSTSQASI 480 LPLVPKVPVR PDIEEPKKPV TLLLKERETP NRVETSLAPK LRMDLKESIL EKCQRIQVLW 540 KTPPEIKLDP EWRVGGGENG KEIEVQRNRN RREKETIYQR VQEIPSNPKE PWDIEMDYDD 600 SLTPEIPIEQ PPDADGTETQ ASLSREGNNA QAWVTYSQGV NSTASLAPAL SQMNGASAAA 660 EPDLELLAVL LKNPELVFAL TSGQAANLSS EDTVKLLDMI KSGGAGNLNG LGRKMEHRVE 720 VSLPSPTPSS NPGTSGWRAD AGRNAFPQQM ATTNNSLVSS AVHMIPSQRL STSQPAVPSY 780 SPDYFPPSMQ TPAASEMVLT MKNTHLNNLS NSYNVAERQP NSFPPPLVST PARQQRQPQQ 840 LQQPRFSEPR LPTHMYPSKP QMGKPGAPPP PSDSWRARQD VPSNYRYLEN QNQYNASYGG 900 PSQQPQLLPG PSWEGNERVG GNQDFESWSP DNSPTRNPGY MYGREPRMNP ARDYMPDRSR 960 QMNPSGYGGQ NRLGNRWPDR GRQ

Sequence ? help Back to Top

Protein Sequence Length: 983 aa Download sequence

MEDLSEMEIG SSVESFQKFL DSQRQLFHSQ IDQLQKVVVT QCNLTGVNPL SQEMAAGALS  60
VKIDGPFAGK RPRDLLNPKA IKYMQSVFSI KDAISKKESR ELSALFGVTG TQVRDFFNSQ  120
RSRVRKLVQL SREKATRSSE HKELLDGVST SSDPLTPIDL VPLNSVGPNS VEDAPSCSTQ  180
DDALSGLDDL DKHFVDNIFN LMRKEETFSG QVKLMEWILQ IQNSSVLCWF LNTGGVMILA  240
TWLSQAAIEE QTSVLLVILK VLCHLPLHKA LPVHMSAILQ SVNRLRFYRT ADVSNRARVL  300
LSRWSKLLAR IQNMKKPNGM KTSSDSQHEL VMLKQSIDEV MGDESWKSNI DIPEDIFATP  360
FENAENSRRS EASEPLKLLT ASSDESNKKQ ILGVSSSQFR ARRKVQLVEQ PGQKSAGRSV  420
QVTRATPVSK GRPMSADDIQ KAKMRAQFMQ SKYGKSGSSN ENKELKTEGG NKLSTSQASI  480
LPLVPKVPVR PDIEEPKKPV TLLLKERETP NRVETSLAPK LRMDLKESIL EKCQRIQVLW  540
KTPPEIKLDP EWRVGGGENG KEIEVQRNRN RREKETIYQR VQEIPSNPKE PWDIEMDYDD  600
SLTPEIPIEQ PPDADGTETQ ASLSREGNNA QAWVTYSQGV NSTASLAPAL SQMNGASAAA  660
EPDLELLAVL LKNPELVFAL TSGQAANLSS EDTVKLLDMI KSGGAGNLNG LGRKMEHRVE  720
VSLPSPTPSS NPGTSGWRAD AGRNAFPQQM ATTNNSLVSS AVHMIPSQRL STSQPAVPSY  780
SPDYFPPSMQ TPAASEMVLT MKNTHLNNLS NSYNVAERQP NSFPPPLVST PARQQRQPQQ  840
LQQPRFSEPR LPTHMYPSKP QMGKPGAPPP PSDSWRARQD VPSNYRYLEN QNQYNASYGG  900
PSQQPQLLPG PSWEGNERVG GNQDFESWSP DNSPTRNPGY MYGREPRMNP ARDYMPDRSR  960
QMNPSGYGGQ NRLGNRWPDR GRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein