PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g745630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARF

Protein Properties

Length: 706aa MW: 78512.7 Da PI: 5.5015

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g745630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.8	4.2e-23	141	249	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE... CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk... 83 f k+ltpsd++++g +++pk+ a+e+ ++++ ++l+ +d++g +W +++i+r++++r++lt+GW+ Fv a++L +gD ++F Pd.00g745630.m01 141 FNKTLTPSDTSTHGGFSVPKRQADEClppldmsQQPP--VQELIARDLQGFEWHFRHIFRGQPKRHLLTSGWSTFVTAKRLVAGDACIFLsnd 231 89***************************744444..458*********************************************9555 PP ...E-SS.SEE..EEEEE- CS B3 84 ...ldgr.sefelvvkvfr 98 r +++el+v+++r Pd.00g745630.m01 232 cnsC-FRgENGELRVGIRR 249 5432.23366667777776 PP
2	Auxin_resp	103.9	2e-34	275	357	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a ha st+++F+v+Y+P++s++ F++++++++k+ k+ +s+GmRf+m fe+++++e+rl+Gt+ +++d d +rWp S+Wr+Lk Pd.00g745630.m01 275 AFHANSTGTMFTVYYRPWTSPAAFIIPYDQYMKSAKNDYSIGMRFRMCFEGDECAEKRLAGTILDIEDNDCIRWPSSEWRCLK 357 67999****************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MAPRTTAGVE GLGPTTVNIA ERESSGCSDG EKDDSYTRLW HACAGPNVYV PRPGEKVFYF 60 PQGHMEQVEA YANEEGKMEM PIYNLPSKIL CNVVCVLLKA EVHTDEVFAQ ITLLPLTEQE 120 QLSLDEENNQ PVPQSTSTRS FNKTLTPSDT STHGGFSVPK RQADECLPPL DMSQQPPVQE 180 LIARDLQGFE WHFRHIFRGQ PKRHLLTSGW STFVTAKRLV AGDACIFLSN DCNSCFRGEN 240 GELRVGIRRA NKKQDNASTA LISGHSMQHG ILASAFHANS TGTMFTVYYR PWTSPAAFII 300 PYDQYMKSAK NDYSIGMRFR MCFEGDECAE KRLAGTILDI EDNDCIRWPS SEWRCLKVQW 360 DASSDTNLHP ERLSPWIIMP LQPNKRAHVP DLMSPGFPNL ATNGLLPIPV EYTPPRQKKV 420 FQGQEISDPP AHEPGTQKPP LLPQFIPPSN PDWNYTQLGL ENNPLHDPLF QCPGSAIAPS 480 LTNQWPPKFN FGVLDSVEFR RSMSVPNIKS SGSQDSRAFK PRSEIEASLV QPNSRGTTML 540 FGVNIVTSHP ELPSPQVVTS SELFSPCSIT PISQSSVSET IQISETSKSV SGVLSAKQCK 600 NCCSVTNRSC IKVLKYGAPV GRSVDLTHFD GYGELISELD QMFDFKGSLI DGSSGWQVTY 660 MDDEGDMMLI GDYLWHEFLS MVQKLYICPK EEIDRLNPGS PNATSL

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MAPRTTAGVE GLGPTTVNIA ERESSGCSDG EKDDSYTRLW HACAGPNVYV PRPGEKVFYF  60
PQGHMEQVEA YANEEGKMEM PIYNLPSKIL CNVVCVLLKA EVHTDEVFAQ ITLLPLTEQE  120
QLSLDEENNQ PVPQSTSTRS FNKTLTPSDT STHGGFSVPK RQADECLPPL DMSQQPPVQE  180
LIARDLQGFE WHFRHIFRGQ PKRHLLTSGW STFVTAKRLV AGDACIFLSN DCNSCFRGEN  240
GELRVGIRRA NKKQDNASTA LISGHSMQHG ILASAFHANS TGTMFTVYYR PWTSPAAFII  300
PYDQYMKSAK NDYSIGMRFR MCFEGDECAE KRLAGTILDI EDNDCIRWPS SEWRCLKVQW  360
DASSDTNLHP ERLSPWIIMP LQPNKRAHVP DLMSPGFPNL ATNGLLPIPV EYTPPRQKKV  420
FQGQEISDPP AHEPGTQKPP LLPQFIPPSN PDWNYTQLGL ENNPLHDPLF QCPGSAIAPS  480
LTNQWPPKFN FGVLDSVEFR RSMSVPNIKS SGSQDSRAFK PRSEIEASLV QPNSRGTTML  540
FGVNIVTSHP ELPSPQVVTS SELFSPCSIT PISQSSVSET IQISETSKSV SGVLSAKQCK  600
NCCSVTNRSC IKVLKYGAPV GRSVDLTHFD GYGELISELD QMFDFKGSLI DGSSGWQVTY  660
MDDEGDMMLI GDYLWHEFLS MVQKLYICPK EEIDRLNPGS PNATSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.2	1e-165	ARF family protein