PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g744670.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 371aa MW: 41222.8 Da PI: 9.9991 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.8 | 2.4e-41 | 216 | 293 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l efD++krsCrrrLa+hn+rrrk+q+ Pd.00g744670.m01 216 RCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVIANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQ 293 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MRKRVRIGRK VAADTTTISE FFSFPKKDLV GKGAPAKTHY IITKMLDYEW GNPSTVMLSP 60 DNDPGSDPTR HHHNTTTIFD HYASQASQAS AFNNLVPPPP PPQQQSHHAA FAHHFNSAQA 120 QQLHSIYDTH AYASASAYAP PNHHPLLSLD PIHGGAAHGL ILVPKSEDLC RPVDFASRIG 180 LNLGGRTYFS SEDDFMNRLY RRTRPATETG SNHAPRCQAE GCTADLSHAK HYHRRHKVCE 240 FHSKASTVIA NGLTQRFCQQ CSRFHLLPEF DNGKRSCRRR LADHNRRRRK TQQTNQENHN 300 SQVQQLVENA RNSSSDNVAR SPPQSAAHSA SSVTVALSPP RMTLDCFRQR PYQAAATTSS 360 GSSSSLFFSS G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 7e-56 | SBP family protein |