PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g744610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 236aa    MW: 25937.6 Da    PI: 6.2286
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g744610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.92.8e-18158192135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  Pd.00g744610.m01 158 CAHCASEKTPQWRAGPMGPKTLCNACGVRFKSGRL 192
                       *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MEDVYGGGAS ASLAQQQDYF PIDDLLDLSN DDLFSSSTSS TDSIDLHPPP PPPHLHVSST  60
PFNPTAATDF TNDLCVPSDD VAELEWLSRF VDDSFTDFPT TNVFGSASFP NDTSSLFPSR  120
VRTNRSKWGG PPEPSDSRAK PKREPSEASP SPSKPRRCAH CASEKTPQWR AGPMGPKTLC  180
NACGVRFKSG RLVPEYRPAA SPTFVLTQHS NSHRKNHTSF HISIDRKEVL DHRVVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.12e-53GATA family protein