PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g744330.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 511aa    MW: 55995 Da    PI: 5.0233
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g744330.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2322.6e-71247510101374
              GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                       aIleaveg +rvH+iDfdi++G+QW++++q+ a R+ g+ps++iT++ s++++++ e+  t+e+L++fA+el+++fe +++  ++l+    + 
  Pd.00g744330.m01 247 AILEAVEGFNRVHVIDFDIGYGGQWASFMQEVALRNCGAPSFKITAFISSSTHDEFEIGFTRENLKHFASELNLSFELELVSLEALN-SGSWG 338
                       9************************************************9*9***************************97444444.44677 PP

              GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                       L ++  E +aV + l + ++ ++++sl+      L++vk+lsPk+vv  ++ +d+++ +F++++++al+ ys l++sl+a    + ++ +k+E
  Pd.00g744330.m01 339 LPLHVSEGVAVAVNLPIGSFSNNPLSLTM----ALRFVKQLSPKIVVSLDRGSDRTDVPFAQQVIQALHSYSGLLESLDAV-NVNPDALQKIE 426
                       76666777777777777888889999999....*********************************************665.34668999*** PP

              GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       r ll++ i+++v+ ++ +     ++   Wr  ++++GF+p+++s+++++qa++l++++++ g+++e+++ slvl+W+++ L+sv++Wr
  Pd.00g744330.m01 427 RYLLQPGIEKIVTGRHLS----PKRTPPWRTLFSSSGFSPLTFSNFTESQAECLVQRTPVGGFHIEKRQSSLVLCWQRKDLISVTVWR 510
                       *************99998....9999*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    
MEDWDGVLSD SPGQEQSILR LIMSDIEDPS LGLNKLLQSG SGSDQQDLEF SAGFHDVVDQ  60
GGYDGFEPNT GNLVSNINVD PSLHATSGSD FAFSNSSPNV QSTNVRLGSS SSPSPMFSAS  120
MNHPFPASLS PGMFQQQQQH IGMDEKPQIF NPQMVMNQNQ AQFTQNPAMF MPLTYAQLQE  180
HHLLSPPPPK RLNSGGFGPN YPGQRAPFSN PGQELLLFNA AELIETGNPA LAQGILARLN  240
HQLSPIAILE AVEGFNRVHV IDFDIGYGGQ WASFMQEVAL RNCGAPSFKI TAFISSSTHD  300
EFEIGFTREN LKHFASELNL SFELELVSLE ALNSGSWGLP LHVSEGVAVA VNLPIGSFSN  360
NPLSLTMALR FVKQLSPKIV VSLDRGSDRT DVPFAQQVIQ ALHSYSGLLE SLDAVNVNPD  420
ALQKIERYLL QPGIEKIVTG RHLSPKRTPP WRTLFSSSGF SPLTFSNFTE SQAECLVQRT  480
PVGGFHIEKR QSSLVLCWQR KDLISVTVWR C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-114GRAS family protein